RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 LRRC37BQ96QE4 947 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 TCHPQ9BT92 498 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 ARHGAP42A6NI28 874 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 GSTA1P08263 222 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 SRGNP10124 158 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 PSMC4P43686 418 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 PLBD2Q8NHP8 589 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
PACS1-201ENST00000320580 ZNF483Q8TF39 744 aaPredicted RBP18.03■□□□□ 0.48
PACS1-201ENST00000320580 TCEAL9Q9UHQ7 104 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 ZNF711Q9Y462 761 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 AHCYL1O43865 530 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 ORC4O43929 436 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 RASSF9O75901 435 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 LMNAP02545 664 aaKnown RBP18.02■□□□□ 0.48
PACS1-201ENST00000320580 ATP4AP20648 1035 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 GNAQP50148 359 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 CREG2Q8IUH2 290 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 SLC17A8Q8NDX2 589 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 DTX3LQ8TDB6 740 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 BIN2Q9UBW5 565 aaPredicted RBP18.02■□□□□ 0.48
PACS1-201ENST00000320580 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 NVLO15381 856 aaKnown RBP18.02■□□□□ 0.48
PACS1-201ENST00000320580 TTI1O43156 1089 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 IGKV5-2P06315 115 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 STRN3Q13033 797 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 TGS1Q96RS0 853 aaKnown RBP18.02■□□□□ 0.48
PACS1-201ENST00000320580 ISCUQ9H1K1 167 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 SHPRHQ149N8 1683 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 UBE2Q2LH0YL09 131 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 TECP42680 631 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 LIFRP42702 1097 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 ERFP50548 548 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 PLCB3Q01970 1234 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 MYOCDQ8IZQ8 938 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 BLIDQ8IZY5 108 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 C6orf50Q9HD87 102 aa18.02■□□□□ 0.48
PACS1-201ENST00000320580 NOC2LQ9Y3T9 749 aaKnown RBP18.02■□□□□ 0.48
PACS1-201ENST00000320580 ALDH5A1P51649 535 aaPredicted RBP18.02■□□□□ 0.47
PACS1-201ENST00000320580 ITIH3Q06033 890 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 MAP3K14Q99558 947 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 ZCWPW1Q9H0M4 648 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 HSD3B7Q9H2F3 369 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 CUEDC2Q9H467 287 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
PACS1-201ENST00000320580 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 DNM1LO00429 736 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ATP5HO75947 161 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ARHGAP18Q8N392 663 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.01■□□□□ 0.472e-6■■■■■ 89.4
PACS1-201ENST00000320580 DNAJC7Q99615 494 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ARPP21Q9UBL0 812 aaPredicted RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 GGA2Q9UJY4 613 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 TBCAO75347 108 aaKnown RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 UPP2O95045 317 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 GSDMBQ8TAX9 411 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 SNX29Q8TEQ0 813 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 CCDC97Q96F63 343 aaPredicted RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ANTXR2P58335 489 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ROR2Q01974 943 aaKnown RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 DISC1Q9NRI5 854 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 CORO1CQ9ULV4 474 aaPredicted RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 C2CD2Q9Y426 696 aa18.01■□□□□ 0.47
PACS1-201ENST00000320580 ATXN2Q99700 1313 aaKnown RBP18.01■□□□□ 0.47
PACS1-201ENST00000320580 ALKBH5Q6P6C2 394 aaKnown RBP18■□□□□ 0.47
PACS1-201ENST00000320580 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
PACS1-201ENST00000320580 STAT1P42224 750 aa18■□□□□ 0.47
PACS1-201ENST00000320580 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
PACS1-201ENST00000320580 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.473e-7■■■□□ 14.8
PACS1-201ENST00000320580 TRIM51Q9BSJ1 452 aa18■□□□□ 0.47
PACS1-201ENST00000320580 BRAFP15056 766 aa18■□□□□ 0.47
PACS1-201ENST00000320580 TPP2P29144 1249 aaPredicted RBP18■□□□□ 0.47
PACS1-201ENST00000320580 TNNI2P48788 182 aa18■□□□□ 0.47
PACS1-201ENST00000320580 MAIP1Q8WWC4 291 aa18■□□□□ 0.47
PACS1-201ENST00000320580 UIMC1Q96RL1 719 aa18■□□□□ 0.47
PACS1-201ENST00000320580 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
PACS1-201ENST00000320580 PANK4Q9NVE7 773 aa18■□□□□ 0.47
PACS1-201ENST00000320580 POC1B-GALNT4F8VUJ3 575 aa18■□□□□ 0.47
PACS1-201ENST00000320580 UBTFL6P0CB48 400 aaPredicted RBP18■□□□□ 0.47
PACS1-201ENST00000320580 RPS6KA3P51812 740 aa18■□□□□ 0.47
PACS1-201ENST00000320580 WLSQ5T9L3 541 aa18■□□□□ 0.47
PACS1-201ENST00000320580 APBB1IPQ7Z5R6 666 aaPredicted RBP18■□□□□ 0.47
PACS1-201ENST00000320580 HIC2Q96JB3 615 aa18■□□□□ 0.47
PACS1-201ENST00000320580 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
PACS1-201ENST00000320580 PASKQ96RG2 1323 aa18■□□□□ 0.47
PACS1-201ENST00000320580 SCG2P13521 617 aa17.99■□□□□ 0.47
PACS1-201ENST00000320580 FNTAP49354 379 aa17.99■□□□□ 0.47
PACS1-201ENST00000320580 ITGB3BPQ13352 177 aaPredicted RBP17.99■□□□□ 0.47
PACS1-201ENST00000320580 TMED2Q15363 201 aa17.99■□□□□ 0.47
PACS1-201ENST00000320580 QPCTQ16769 361 aa17.99■□□□□ 0.47
PACS1-201ENST00000320580 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
PACS1-201ENST00000320580 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
PACS1-201ENST00000320580 SRRM1Q8IYB3 904 aaKnown RBP17.99■□□□□ 0.47
PACS1-201ENST00000320580 ELOA2Q8IYF1 753 aaPredicted RBP17.99■□□□□ 0.47
PACS1-201ENST00000320580 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms