RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 PTK2Q05397 1052 aa14.89□□□□□ -0.03
CTTN-201ENST00000301843 A0A087WUV0 522 aaPredicted RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 TMOD1P28289 359 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 PSMC6P62333 389 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 GPSM2P81274 684 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 HDLBPQ00341 1268 aaKnown RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 FKBP3Q00688 224 aaKnown RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 ADAM9Q13443 819 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 EMBQ6PCB8 327 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 NEDD1Q8NHV4 660 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 NEUROG2Q9H2A3 272 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 AJAP1Q9UKB5 411 aaPredicted RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 PCDHA12Q9UN75 941 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 H0YHG0 523 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 CYP4A11Q02928 519 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 IPO4Q8TEX9 1081 aaKnown RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 CELF4Q9BZC1 486 aaKnown RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 MAGEF1Q9HAY2 307 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 ATP6V0A2Q9Y487 856 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 CLIC2O15247 247 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 LCA5LO95447 670 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 LSP1P33241 339 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 ERVK-9P63128 1117 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 LRRC63Q05C16 580 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 KCNA1Q09470 495 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■■□□□ 13.2
CTTN-201ENST00000301843 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 ADGRF4Q8IZF3 695 aa14.88□□□□□ -0.03
CTTN-201ENST00000301843 ARHGEF1Q92888 912 aaKnown RBP14.88□□□□□ -0.03
CTTN-201ENST00000301843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.037e-7■■■■■ 88.8
CTTN-201ENST00000301843 E7EVH7 732 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 NR1D1P20393 614 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 KCNH2Q12809 1159 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
CTTN-201ENST00000301843 ZNF571Q7Z3V5 609 aaPredicted RBP14.87□□□□□ -0.03
CTTN-201ENST00000301843 GPATCH11Q8N954 259 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 SCFD1Q8WVM8 642 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
CTTN-201ENST00000301843 PVALEFA0A1B0GWK0 134 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 DCDC2CA8MYV0 355 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 RSPH10B2B2RC85 870 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 SERPING1P05155 500 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 RSPH10BP0C881 870 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 NT5C2P49902 561 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 SCNN1DP51172 638 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 ASIC2Q16515 512 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 IQCKQ8N0W5 287 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 JMJD4Q9H9V9 463 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 CEP72Q9P209 647 aa14.87□□□□□ -0.03
CTTN-201ENST00000301843 SBF2Q86WG5 1849 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 PJA2O43164 708 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 NR2F2P24468 414 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 RFC4P35249 363 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 MNAT1P51948 309 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 CACNB3P54284 484 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 IFT88Q13099 833 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 NAB2Q15742 525 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 KCNV1Q6PIU1 500 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 KSR1Q8IVT5 923 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 STK17AQ9UEE5 414 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 AMACRQ9UHK6 382 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 ROBO3Q96MS0 1386 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 BTAF1O14981 1849 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 PLA2G4BP0C869 781 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 PAK2Q13177 524 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 LLGL1Q15334 1064 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 VPS72Q15906 364 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 INPP4AQ96PE3 977 aaPredicted RBP14.86□□□□□ -0.03
CTTN-201ENST00000301843 CD209Q9NNX6 404 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 FGFR1OPO95684 399 aaKnown RBP14.86□□□□□ -0.03
CTTN-201ENST00000301843 PRLRP16471 622 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 CASP4P49662 377 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■□□ 14.9
CTTN-201ENST00000301843 PRPF4BQ13523 1007 aaKnown RBP14.86□□□□□ -0.03
CTTN-201ENST00000301843 ZCWPW2Q504Y3 356 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 UBLCP1Q8WVY7 318 aaPredicted RBP14.86□□□□□ -0.03
CTTN-201ENST00000301843 GDF3Q9NR23 364 aa14.86□□□□□ -0.03
CTTN-201ENST00000301843 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
CTTN-201ENST00000301843 SMIM23A6NLE4 172 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 MED24O75448 989 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 RHBDL3P58872 404 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 GTF2IP78347 998 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 MEI1Q5TIA1 1274 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
CTTN-201ENST00000301843 ZNF804AQ7Z570 1209 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 TAF4BQ92750 862 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 CAVIN3Q969G5 261 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 LZTS2Q9BRK4 669 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 RAB34Q9BZG1 259 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 DDX4Q9NQI0 724 aaKnown RBP14.85□□□□□ -0.03
CTTN-201ENST00000301843 HNRNPH1P31943 449 aaKnown RBP14.85□□□□□ -0.03
CTTN-201ENST00000301843 RPS6KA1Q15418 735 aa14.85□□□□□ -0.03
CTTN-201ENST00000301843 ODF2Q5BJF6 829 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms