RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pabpc6Q9D4E6 643 aaKnown RBP10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Cnbd2Q9D5U8 673 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ddx25Q9QY15 484 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Grm3Q9QYS2 879 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tnnt3Q9QZ47 272 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ercc4Q9QZD4 917 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Phf2Q9WTU0 1096 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Coro1cQ9WUM4 474 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gfpt2Q9Z2Z9 682 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Plekhg1F6S200 1446 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cspp1B2RX88 1205 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gm3327F7C9A1 213 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Wnt5bP22726 359 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Idi1P58044 227 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Adamts19P59509 1210 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nxpe4Q52KP5 543 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cyb5d1Q5NCY3 228 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ddx3yQ62095 658 aaKnown RBP10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Insm1Q63ZV0 521 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Slain1Q68FF7 579 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Lyve1Q8BHC0 318 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccdc30Q8BVF4 654 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rapgef5Q8C0Q9 814 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Edem1Q925U4 652 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Wdr6Q99ME2 1125 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Kcnq5Q9JK45 933 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Akap8lQ9R0L7 642 aaKnown RBP10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cntnap1O54991 1385 aa10.02□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gm6576F6YTZ4 274 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Scgb1b3J3QJY4 93 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PomcP01193 235 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cd9P40240 226 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gpr182P43142 395 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 MafP54843 370 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rin3P59729 980 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 HarsQ61035 509 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 GcgrQ61606 485 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ddrgk1Q80WW9 315 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccdc87Q8CDL9 855 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 OplahQ8K010 1288 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cbwd1Q8VEH6 393 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Klhdc4Q921I2 584 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 BniplQ99JU7 328 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Spry1Q9QXV9 313 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Krt71Q9R0H5 524 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Pdcd7Q9WTY1 482 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Large1Q9Z1M7 756 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rreb1Q3UH06 1700 aaKnown RBP10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Magea5O89009 320 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rab20P35295 233 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Dcaf7P61963 342 aaKnown RBP10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Slc9a2Q3ZAS0 814 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rc3h1Q4VGL6 1130 aaKnown RBP10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Paxip1Q6NZQ4 1056 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Lhfpl2Q8BGA2 222 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cdc23Q8BGZ4 597 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Usp40Q8BWR4 1235 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 MypopQ8R4U1 393 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 HpgdQ8VCC1 269 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 ChtopQ9CY57 249 aaKnown RBP10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Agpat5Q9D1E8 365 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rsph14Q9D3W1 341 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ubxn11Q9D572 484 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Cwc15Q9JHS9 229 aaKnown RBP10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Atp2b2Q9R0K7 1198 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Pld1Q9Z280 1074 aa10.01□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Slit2Q9R1B9 1521 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Itpripl1A2ASA8 547 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Spata31d1dE9Q5W2 1247 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 LipiF6YQT7 476 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Pex5O09012 639 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 NmiO35309 314 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Rtn2O70622 471 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Il12rb2P97378 874 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Il6stQ00560 917 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Hspa4Q61316 841 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Pcdhb14Q6PB90 796 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Gpr156Q6PCP7 798 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Mtrf1lQ8BJU9 373 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 TbcdQ8BYA0 1196 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 BphlQ8R164 291 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Slc26a7Q8R2Z3 656 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ccdc92Q8VDN4 314 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ptbp2Q91Z31 531 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Msi2Q920Q6 346 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nlgn1Q99K10 843 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PdhbQ9D051 359 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Habp4Q9JKS5 411 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 MthfrQ9WU20 654 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Arid3bQ9Z1N7 568 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 D430041D05RikF6ZGR6 1678 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zfp780bE9Q2S6 806 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Atxn2O70305 1285 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Zfp42P22227 288 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ptpn5P54830 541 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Psme2P97372 239 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Arglu1Q3UL36 271 aaKnown RBP10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 PsdQ5DTT2 1024 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Ppp5cQ60676 499 aa10□□□□□ -0.81
Upf3b-201ENSMUST00000076265 Nfe2l2Q60795 597 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms