RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W VPS45P38932 577 aa2.24□□□□□ -2.05
VPS16YPL045W SAS2P40963 338 aa2.24□□□□□ -2.05
VPS16YPL045W POP1P41812 875 aa2.24□□□□□ -2.05
VPS16YPL045W ASN2P49090 572 aaKnown RBP2.24□□□□□ -2.05
VPS16YPL045W PIB2P53191 635 aa2.24□□□□□ -2.05
VPS16YPL045W EKI1Q03764 534 aa2.24□□□□□ -2.05
VPS16YPL045W CUR1Q06469 252 aa2.24□□□□□ -2.05
VPS16YPL045W SOR2Q07786 357 aa2.24□□□□□ -2.05
VPS16YPL045W CEX1Q12453 761 aa2.24□□□□□ -2.05
VPS16YPL045W SRN2Q99176 213 aa2.24□□□□□ -2.05
VPS16YPL045W IML1P47170 1584 aa2.24□□□□□ -2.05
VPS16YPL045W TY1B-NL2Q99337 1749 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W NFT1P0CE68 1218 aa2.23□□□□□ -2.05
VPS16YPL045W CDC43P18898 376 aa2.23□□□□□ -2.05
VPS16YPL045W YSC83P32792 385 aa2.23□□□□□ -2.05
VPS16YPL045W OLA1P38219 394 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W LIN1P38852 340 aaPredicted RBP2.23□□□□□ -2.05
VPS16YPL045W YMR124WP39523 943 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W SSO2P39926 295 aa2.23□□□□□ -2.05
VPS16YPL045W GAT2P40209 560 aa2.23□□□□□ -2.05
VPS16YPL045W PHO86P46956 311 aa2.23□□□□□ -2.05
VPS16YPL045W BPL1P48445 690 aaPredicted RBP2.23□□□□□ -2.05
VPS16YPL045W YPL014WQ02606 381 aa2.23□□□□□ -2.05
VPS16YPL045W EGD1Q02642 157 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W HSP31Q04432 237 aa2.23□□□□□ -2.05
VPS16YPL045W IPK1Q06667 281 aa2.23□□□□□ -2.05
VPS16YPL045W YOR012WQ12351 137 aa2.23□□□□□ -2.05
VPS16YPL045W VPS63O13549 108 aa2.23□□□□□ -2.05
VPS16YPL045W BAR1P12630 587 aa2.23□□□□□ -2.05
VPS16YPL045W GCD2P12754 651 aaPredicted RBP2.23□□□□□ -2.05
VPS16YPL045W RPS2P25443 254 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W HSP104P31539 908 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W QDR3P38227 689 aa2.23□□□□□ -2.05
VPS16YPL045W SPP381P38282 291 aaPredicted RBP2.23□□□□□ -2.05
VPS16YPL045W MNN9P39107 395 aaKnown RBP2.23□□□□□ -2.05
VPS16YPL045W MRK1P50873 501 aa2.23□□□□□ -2.05
VPS16YPL045W GND2P53319 492 aa2.23□□□□□ -2.05
VPS16YPL045W RHO4Q00246 291 aa2.23□□□□□ -2.05
VPS16YPL045W RNH1Q04740 348 aa2.23□□□□□ -2.05
VPS16YPL045W PUS9Q12069 462 aa2.23□□□□□ -2.05
VPS16YPL045W YLR111WQ12528 110 aa2.23□□□□□ -2.05
VPS16YPL045W RPN13O13563 156 aa2.22□□□□□ -2.05
VPS16YPL045W ERG11P10614 530 aa2.22□□□□□ -2.05
VPS16YPL045W PUT4P15380 627 aa2.22□□□□□ -2.05
VPS16YPL045W LAG1P38703 411 aa2.22□□□□□ -2.05
VPS16YPL045W CHS7P38843 316 aa2.22□□□□□ -2.05
VPS16YPL045W SPC97P38863 823 aa2.22□□□□□ -2.05
VPS16YPL045W YEL020CP39994 560 aa2.22□□□□□ -2.05
VPS16YPL045W YFR018CP43599 363 aa2.22□□□□□ -2.05
VPS16YPL045W SHE10P53075 577 aa2.22□□□□□ -2.05
VPS16YPL045W SOL4P53315 255 aa2.22□□□□□ -2.05
VPS16YPL045W APM1Q00776 475 aaPredicted RBP2.22□□□□□ -2.05
VPS16YPL045W SWF1Q04629 336 aa2.22□□□□□ -2.05
VPS16YPL045W SMA2Q04658 369 aa2.22□□□□□ -2.05
VPS16YPL045W YLR413WQ06689 675 aa2.22□□□□□ -2.05
VPS16YPL045W YDL218WQ07629 317 aa2.22□□□□□ -2.05
VPS16YPL045W NSE1Q07913 336 aa2.22□□□□□ -2.05
VPS16YPL045W RDR1Q08904 546 aa2.22□□□□□ -2.05
VPS16YPL045W PFA4Q12006 378 aa2.22□□□□□ -2.05
VPS16YPL045W RAD61Q99359 647 aa2.22□□□□□ -2.05
VPS16YPL045W RPB8P20436 146 aa2.22□□□□□ -2.05
VPS16YPL045W PSO2P30620 661 aa2.22□□□□□ -2.05
VPS16YPL045W UTR4P32626 227 aa2.22□□□□□ -2.05
VPS16YPL045W RAD24P32641 659 aa2.22□□□□□ -2.05
VPS16YPL045W NRP1P32770 719 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VPS16YPL045W REC114P32841 428 aa2.22□□□□□ -2.05
VPS16YPL045W KAP104P38217 918 aaKnown RBP2.22□□□□□ -2.05
VPS16YPL045W APD1P38281 316 aa2.22□□□□□ -2.05
VPS16YPL045W RTT107P38850 1070 aa2.22□□□□□ -2.05
VPS16YPL045W YHR177WP38867 453 aa2.22□□□□□ -2.05
VPS16YPL045W PCF11P39081 626 aaPredicted RBP2.22□□□□□ -2.05
VPS16YPL045W PHO90P39535 881 aa2.22□□□□□ -2.05
VPS16YPL045W PAC2P39937 518 aa2.22□□□□□ -2.05
VPS16YPL045W AIM20P40451 204 aa2.22□□□□□ -2.05
VPS16YPL045W YPS6P40583 537 aa2.22□□□□□ -2.05
VPS16YPL045W GCD10P41814 478 aa2.22□□□□□ -2.05
VPS16YPL045W UBP8P50102 471 aa2.22□□□□□ -2.05
VPS16YPL045W YIF1P53845 314 aaKnown RBP2.22□□□□□ -2.05
VPS16YPL045W NUP100Q02629 959 aa2.22□□□□□ -2.05
VPS16YPL045W STD1Q02794 444 aa2.22□□□□□ -2.05
VPS16YPL045W RRN5Q02983 363 aa2.22□□□□□ -2.05
VPS16YPL045W YDR387CQ04162 555 aa2.22□□□□□ -2.05
VPS16YPL045W ARP10Q04549 284 aa2.22□□□□□ -2.05
VPS16YPL045W ECM18Q04623 453 aa2.22□□□□□ -2.05
VPS16YPL045W STE23Q06010 1027 aa2.22□□□□□ -2.05
VPS16YPL045W SNT309Q06091 175 aaPredicted RBP2.22□□□□□ -2.05
VPS16YPL045W KAP95Q06142 861 aaKnown RBP2.22□□□□□ -2.05
VPS16YPL045W TPO3Q06451 622 aa2.22□□□□□ -2.05
VPS16YPL045W BSP1Q06604 576 aa2.22□□□□□ -2.05
VPS16YPL045W BUG1Q12191 341 aa2.22□□□□□ -2.05
VPS16YPL045W RKM5Q12367 367 aa2.22□□□□□ -2.05
VPS16YPL045W MRPL23Q12487 163 aaPredicted RBP2.22□□□□□ -2.05
VPS16YPL045W YIL002W-AQ3E7Z5 69 aa2.22□□□□□ -2.05
VPS16YPL045W NUP192P47054 1683 aa2.21□□□□□ -2.05
VPS16YPL045W YPT1P01123 206 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W CDC37P06101 506 aaKnown RBP2.21□□□□□ -2.06
VPS16YPL045W CHS1P08004 1131 aa2.21□□□□□ -2.06
VPS16YPL045W PET18P25362 215 aa2.21□□□□□ -2.06
VPS16YPL045W PPZ1P26570 692 aa2.21□□□□□ -2.06
VPS16YPL045W SNC1P31109 117 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms