RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W REV1P12689 985 aa3.48□□□□□ -1.85
LCB5YLR260W LRE1P25579 583 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W GEX1P25596 615 aa3.48□□□□□ -1.85
LCB5YLR260W HXT1P32465 570 aa3.48□□□□□ -1.85
LCB5YLR260W RML2P32611 393 aa3.48□□□□□ -1.85
LCB5YLR260W TSA1P34760 196 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W KAE1P36132 386 aa3.48□□□□□ -1.85
LCB5YLR260W GEX2P36173 615 aa3.48□□□□□ -1.85
LCB5YLR260W CBR1P38626 284 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W SEC31P38968 1273 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W PZF1P39933 429 aa3.48□□□□□ -1.85
LCB5YLR260W HXT14P42833 540 aa3.48□□□□□ -1.85
LCB5YLR260W PHO86P46956 311 aa3.48□□□□□ -1.85
LCB5YLR260W GTO1P48239 356 aa3.48□□□□□ -1.85
LCB5YLR260W YDL183CP48569 320 aa3.48□□□□□ -1.85
LCB5YLR260W BIO3P50277 480 aa3.48□□□□□ -1.85
LCB5YLR260W MND1P53102 219 aa3.48□□□□□ -1.85
LCB5YLR260W UTP6Q02354 440 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W CLU1Q03690 1277 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W VTA1Q06263 330 aa3.48□□□□□ -1.85
LCB5YLR260W BRX1Q08235 291 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W TGS1Q12052 315 aa3.48□□□□□ -1.85
LCB5YLR260W NTO1Q12311 748 aa3.48□□□□□ -1.85
LCB5YLR260W ERG27Q12452 347 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W PPR1P07272 904 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W PET494P07390 489 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W FRS1P15624 595 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W SRV2P17555 526 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W UGA1P17649 471 aa3.48□□□□□ -1.85
LCB5YLR260W PET18P25362 215 aa3.48□□□□□ -1.85
LCB5YLR260W GID7P25569 745 aa3.48□□□□□ -1.85
LCB5YLR260W NDI1P32340 513 aa3.48□□□□□ -1.85
LCB5YLR260W PET127P32606 800 aa3.48□□□□□ -1.85
LCB5YLR260W SEC66P33754 206 aa3.48□□□□□ -1.85
LCB5YLR260W WBP1P33767 430 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W MAK5P38112 773 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W YBR053CP38235 358 aa3.48□□□□□ -1.85
LCB5YLR260W APD1P38281 316 aa3.48□□□□□ -1.85
LCB5YLR260W TAE1P38340 232 aa3.48□□□□□ -1.85
LCB5YLR260W YHR045WP38775 560 aa3.48□□□□□ -1.85
LCB5YLR260W BTT1P40314 149 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W RPA34P47006 233 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W PRP31P49704 494 aaPredicted RBP3.48□□□□□ -1.85
LCB5YLR260W VEL1P53058 206 aa3.48□□□□□ -1.85
LCB5YLR260W COQ6P53318 479 aa3.48□□□□□ -1.85
LCB5YLR260W YDR179W-AQ03983 463 aa3.48□□□□□ -1.85
LCB5YLR260W ARO80Q04052 950 aa3.48□□□□□ -1.85
LCB5YLR260W SMA2Q04658 369 aa3.48□□□□□ -1.85
LCB5YLR260W GTO3Q04806 366 aa3.48□□□□□ -1.85
LCB5YLR260W GFD1Q04839 188 aaKnown RBP3.48□□□□□ -1.85
LCB5YLR260W YFH1Q07540 174 aa3.48□□□□□ -1.85
LCB5YLR260W BI2P03873 423 aa3.47□□□□□ -1.85
LCB5YLR260W ILV5P06168 395 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W RAP1P11938 827 aa3.47□□□□□ -1.85
LCB5YLR260W VPS33P20795 691 aa3.47□□□□□ -1.85
LCB5YLR260W YCL068CP25593 260 aa3.47□□□□□ -1.85
LCB5YLR260W PRE4P30657 266 aa3.47□□□□□ -1.85
LCB5YLR260W ARO4P32449 370 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W HCS1P34243 683 aa3.47□□□□□ -1.85
LCB5YLR260W SMF2P38778 549 aa3.47□□□□□ -1.85
LCB5YLR260W YHR182WP38870 785 aa3.47□□□□□ -1.85
LCB5YLR260W MTW1P39731 289 aa3.47□□□□□ -1.85
LCB5YLR260W ERG10P41338 398 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W YJL107CP42947 387 aa3.47□□□□□ -1.85
LCB5YLR260W YJL132WP47014 750 aa3.47□□□□□ -1.85
LCB5YLR260W YGR149WP48236 432 aa3.47□□□□□ -1.85
LCB5YLR260W YGR126WP53274 230 aa3.47□□□□□ -1.85
LCB5YLR260W SPO19Q03029 223 aa3.47□□□□□ -1.85
LCB5YLR260W RLI1Q03195 608 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W ACL4Q03771 387 aa3.47□□□□□ -1.85
LCB5YLR260W SPG3Q04398 127 aaPredicted RBP3.47□□□□□ -1.85
LCB5YLR260W ASM4Q05166 528 aa3.47□□□□□ -1.85
LCB5YLR260W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
LCB5YLR260W EMP46Q12396 444 aa3.47□□□□□ -1.85
LCB5YLR260W PNO1Q99216 274 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W BI3Q9ZZW7 517 aa3.47□□□□□ -1.85
LCB5YLR260W FMP27Q06179 2628 aa3.47□□□□□ -1.85
LCB5YLR260W SCH9P11792 824 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W SPO7P18410 259 aa3.47□□□□□ -1.85
LCB5YLR260W APA2P22108 325 aa3.47□□□□□ -1.85
LCB5YLR260W KIN3P22209 435 aa3.47□□□□□ -1.85
LCB5YLR260W YCR016WP25617 290 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W YIH1P25637 258 aa3.47□□□□□ -1.85
LCB5YLR260W PRE2P30656 287 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W TCD2P36101 447 aaKnown RBP3.47□□□□□ -1.85
LCB5YLR260W PTC7P38797 343 aa3.47□□□□□ -1.85
LCB5YLR260W RTT107P38850 1070 aa3.47□□□□□ -1.85
LCB5YLR260W YER189WP40104 122 aa3.47□□□□□ -1.85
LCB5YLR260W IME4P41833 600 aa3.47□□□□□ -1.85
LCB5YLR260W OTU1P43558 301 aa3.47□□□□□ -1.85
LCB5YLR260W CTK2P46962 323 aa3.47□□□□□ -1.85
LCB5YLR260W NMA2P53204 395 aa3.47□□□□□ -1.85
LCB5YLR260W YGR067CP53243 804 aa3.47□□□□□ -1.85
LCB5YLR260W TRM112P53738 135 aaPredicted RBP3.47□□□□□ -1.85
LCB5YLR260W RPM2Q02773 1202 aa3.47□□□□□ -1.85
LCB5YLR260W SRL4Q03085 281 aa3.47□□□□□ -1.85
LCB5YLR260W STE23Q06010 1027 aa3.47□□□□□ -1.85
LCB5YLR260W AEP3Q12089 606 aa3.47□□□□□ -1.85
LCB5YLR260W CMC2Q3E7A4 109 aa3.47□□□□□ -1.85
LCB5YLR260W TRP3P00937 484 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms