RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W NHP10Q03435 203 aa3.68□□□□□ -1.82
SSL1YLR005W ROY1Q04847 553 aa3.68□□□□□ -1.82
SSL1YLR005W ATG23Q06671 453 aa3.68□□□□□ -1.82
SSL1YLR005W VAC14Q06708 880 aa3.68□□□□□ -1.82
SSL1YLR005W ICT1Q12385 394 aa3.68□□□□□ -1.82
SSL1YLR005W SLH1P53327 1967 aaKnown RBP3.68□□□□□ -1.82
SSL1YLR005W PHO5P00635 467 aa3.67□□□□□ -1.82
SSL1YLR005W HSP26P15992 214 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SSL1YLR005W SPO16P17122 198 aa3.67□□□□□ -1.82
SSL1YLR005W CDC43P18898 376 aa3.67□□□□□ -1.82
SSL1YLR005W PHO3P24031 467 aa3.67□□□□□ -1.82
SSL1YLR005W NAM9P27929 486 aa3.67□□□□□ -1.82
SSL1YLR005W URA7P28274 579 aaKnown RBP3.67□□□□□ -1.82
SSL1YLR005W IME2P32581 645 aa3.67□□□□□ -1.82
SSL1YLR005W UBC6P33296 250 aaPredicted RBP3.67□□□□□ -1.82
SSL1YLR005W PPZ2P33329 710 aa3.67□□□□□ -1.82
SSL1YLR005W PEX6P33760 1030 aa3.67□□□□□ -1.82
SSL1YLR005W MIA40P36046 403 aa3.67□□□□□ -1.82
SSL1YLR005W INM1P38710 295 aa3.67□□□□□ -1.82
SSL1YLR005W EFM1P38732 585 aa3.67□□□□□ -1.82
SSL1YLR005W YHI9P38765 294 aa3.67□□□□□ -1.82
SSL1YLR005W GPI16P38875 610 aa3.67□□□□□ -1.82
SSL1YLR005W FMP52P40008 231 aa3.67□□□□□ -1.82
SSL1YLR005W YER034WP40022 185 aaKnown RBP3.67□□□□□ -1.82
SSL1YLR005W SEC9P40357 651 aa3.67□□□□□ -1.82
SSL1YLR005W SAE2P46946 345 aa3.67□□□□□ -1.82
SSL1YLR005W GCD14P46959 383 aaPredicted RBP3.67□□□□□ -1.82
SSL1YLR005W BOL2P53082 120 aa3.67□□□□□ -1.82
SSL1YLR005W ERG26P53199 349 aaKnown RBP3.67□□□□□ -1.82
SSL1YLR005W SNP1Q00916 300 aaPredicted RBP3.67□□□□□ -1.82
SSL1YLR005W UTP6Q02354 440 aaKnown RBP3.67□□□□□ -1.82
SSL1YLR005W ECI1Q05871 280 aa3.67□□□□□ -1.82
SSL1YLR005W RAX1Q08760 435 aa3.67□□□□□ -1.82
SSL1YLR005W YOR342CQ12182 319 aa3.67□□□□□ -1.82
SSL1YLR005W Q0142Q9ZZW4 58 aa3.67□□□□□ -1.82
SSL1YLR005W RPB4P20433 221 aaPredicted RBP3.66□□□□□ -1.82
SSL1YLR005W BEM3P32873 1128 aa3.66□□□□□ -1.82
SSL1YLR005W SOL2P37262 315 aa3.66□□□□□ -1.82
SSL1YLR005W PCH2P38126 564 aa3.66□□□□□ -1.82
SSL1YLR005W RRN10P38204 145 aa3.66□□□□□ -1.82
SSL1YLR005W YBR071WP38243 211 aa3.66□□□□□ -1.82
SSL1YLR005W GGC1P38988 300 aa3.66□□□□□ -1.82
SSL1YLR005W PRP39P39682 629 aaKnown RBP3.66□□□□□ -1.82
SSL1YLR005W NPT1P39683 429 aaKnown RBP3.66□□□□□ -1.82
SSL1YLR005W FRT2P39734 528 aa3.66□□□□□ -1.82
SSL1YLR005W PRP31P49704 494 aaPredicted RBP3.66□□□□□ -1.82
SSL1YLR005W LCL3P53153 274 aa3.66□□□□□ -1.82
SSL1YLR005W MTL1P53214 551 aa3.66□□□□□ -1.82
SSL1YLR005W FHN1P53279 174 aa3.66□□□□□ -1.82
SSL1YLR005W YNL092WP53934 400 aa3.66□□□□□ -1.82
SSL1YLR005W SLT2Q00772 484 aa3.66□□□□□ -1.82
SSL1YLR005W YDL218WQ07629 317 aa3.66□□□□□ -1.82
SSL1YLR005W ENT4Q07872 247 aa3.66□□□□□ -1.82
SSL1YLR005W TPO4Q12256 659 aa3.66□□□□□ -1.82
SSL1YLR005W STE2D6VTK4 431 aa3.65□□□□□ -1.82
SSL1YLR005W STE3P06783 470 aa3.65□□□□□ -1.82
SSL1YLR005W CDC21P06785 304 aa3.65□□□□□ -1.82
SSL1YLR005W SEC53P07283 254 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W TRX2P22803 104 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W GRR1P24814 1151 aa3.65□□□□□ -1.82
SSL1YLR005W SPS22P25380 463 aa3.65□□□□□ -1.82
SSL1YLR005W FAA1P30624 700 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W CRM1P30822 1084 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W EMP65P40085 556 aa3.65□□□□□ -1.82
SSL1YLR005W VMA13P41807 478 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W BAP3P41815 604 aa3.65□□□□□ -1.82
SSL1YLR005W CUP9P41817 306 aa3.65□□□□□ -1.82
SSL1YLR005W YFL012WP43580 148 aa3.65□□□□□ -1.82
SSL1YLR005W APT1P49435 187 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W OCA1P50946 238 aaPredicted RBP3.65□□□□□ -1.82
SSL1YLR005W CLD1P53264 445 aa3.65□□□□□ -1.82
SSL1YLR005W YNL260CP53846 198 aa3.65□□□□□ -1.82
SSL1YLR005W COG6P53959 839 aa3.65□□□□□ -1.82
SSL1YLR005W AAT1Q01802 451 aa3.65□□□□□ -1.82
SSL1YLR005W NUP53Q03790 475 aa3.65□□□□□ -1.82
SSL1YLR005W NOP6Q07623 225 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W REX3Q12090 404 aa3.65□□□□□ -1.82
SSL1YLR005W YPR022CQ12139 1133 aa3.65□□□□□ -1.82
SSL1YLR005W RIO1Q12196 484 aaKnown RBP3.65□□□□□ -1.82
SSL1YLR005W PST1Q12355 444 aa3.65□□□□□ -1.82
SSL1YLR005W SRN2Q99176 213 aa3.65□□□□□ -1.82
SSL1YLR005W TEF1P02994 458 aaKnown RBP3.64□□□□□ -1.83
SSL1YLR005W GLK1P17709 500 aaKnown RBP3.64□□□□□ -1.83
SSL1YLR005W AMD2P22580 549 aa3.64□□□□□ -1.83
SSL1YLR005W MGR1P25573 417 aa3.64□□□□□ -1.83
SSL1YLR005W TAH1P25638 111 aaPredicted RBP3.64□□□□□ -1.83
SSL1YLR005W MKK1P32490 508 aa3.64□□□□□ -1.83
SSL1YLR005W MTC2P34246 357 aa3.64□□□□□ -1.83
SSL1YLR005W HES1P35843 434 aa3.64□□□□□ -1.83
SSL1YLR005W KKQ8P36004 724 aa3.64□□□□□ -1.83
SSL1YLR005W RPC37P36121 282 aa3.64□□□□□ -1.83
SSL1YLR005W ASC1P38011 319 aaKnown RBP3.64□□□□□ -1.83
SSL1YLR005W MUP3P38734 546 aa3.64□□□□□ -1.83
SSL1YLR005W RIX1P38883 763 aaPredicted RBP3.64□□□□□ -1.83
SSL1YLR005W YEL020CP39994 560 aa3.64□□□□□ -1.83
SSL1YLR005W APQ12P40532 138 aa3.64□□□□□ -1.83
SSL1YLR005W SHY1P53266 389 aa3.64□□□□□ -1.83
SSL1YLR005W HOL1P53389 586 aa3.64□□□□□ -1.83
SSL1YLR005W BOP3P53958 396 aa3.64□□□□□ -1.83
SSL1YLR005W FDC1Q03034 503 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms