RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C CDC1P40986 491 aa5.57□□□□□ -1.52
VPS72YDR485C RIM8P53179 542 aa5.57□□□□□ -1.52
VPS72YDR485C RAD34Q06665 692 aa5.57□□□□□ -1.52
VPS72YDR485C THP1Q08231 455 aa5.57□□□□□ -1.52
VPS72YDR485C MCA1Q08601 432 aa5.57□□□□□ -1.52
VPS72YDR485C RDR1Q08904 546 aa5.57□□□□□ -1.52
VPS72YDR485C PUS9Q12069 462 aa5.57□□□□□ -1.52
VPS72YDR485C YDR262WQ12331 272 aa5.57□□□□□ -1.52
VPS72YDR485C RNH203Q12338 110 aa5.57□□□□□ -1.52
VPS72YDR485C ATG31Q12421 196 aa5.57□□□□□ -1.52
VPS72YDR485C TKL1P23254 680 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C RGT1P32862 1170 aa5.56□□□□□ -1.52
VPS72YDR485C BMH2P34730 273 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C RPC37P36121 282 aa5.56□□□□□ -1.52
VPS72YDR485C PIH1P38768 344 aa5.56□□□□□ -1.52
VPS72YDR485C SAS2P40963 338 aa5.56□□□□□ -1.52
VPS72YDR485C TSR1Q07381 788 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C YOR365CQ08844 703 aa5.56□□□□□ -1.52
VPS72YDR485C RAD52P06778 471 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C CHS1P08004 1131 aa5.56□□□□□ -1.52
VPS72YDR485C MET3P08536 511 aa5.56□□□□□ -1.52
VPS72YDR485C YMR085WP0CF18 432 aa5.56□□□□□ -1.52
VPS72YDR485C RPS16AP0CX51 143 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C RPS16BP0CX52 143 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C ATP11P32453 318 aa5.56□□□□□ -1.52
VPS72YDR485C ECT1P33412 323 aa5.56□□□□□ -1.52
VPS72YDR485C MSN2P33748 704 aa5.56□□□□□ -1.52
VPS72YDR485C SHP1P34223 423 aa5.56□□□□□ -1.52
VPS72YDR485C TCD1P38756 429 aa5.56□□□□□ -1.52
VPS72YDR485C PMT5P52867 743 aa5.56□□□□□ -1.52
VPS72YDR485C CGR1P53188 120 aa5.56□□□□□ -1.52
VPS72YDR485C YGR117CP53270 476 aa5.56□□□□□ -1.52
VPS72YDR485C RTN1Q04947 295 aaKnown RBP5.56□□□□□ -1.52
VPS72YDR485C BSC6Q08280 497 aa5.56□□□□□ -1.52
VPS72YDR485C YPR022CQ12139 1133 aa5.56□□□□□ -1.52
VPS72YDR485C SAR1P20606 190 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C COQ2P32378 372 aa5.55□□□□□ -1.52
VPS72YDR485C SRB4P32569 687 aa5.55□□□□□ -1.52
VPS72YDR485C KAP104P38217 918 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C PRP39P39682 629 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C YMR310CQ04867 317 aaPredicted RBP5.55□□□□□ -1.52
VPS72YDR485C YER145C-AA0A023PYF4 145 aa5.55□□□□□ -1.52
VPS72YDR485C RPL18AP0CX49 186 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C RPL18BP0CX50 186 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C RVS161P25343 265 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C CWP1P28319 239 aa5.55□□□□□ -1.52
VPS72YDR485C ECM25P32525 599 aa5.55□□□□□ -1.52
VPS72YDR485C ECM4P36156 370 aa5.55□□□□□ -1.52
VPS72YDR485C STE24P47154 453 aa5.55□□□□□ -1.52
VPS72YDR485C TRF5P48561 642 aaKnown RBP5.55□□□□□ -1.52
VPS72YDR485C CTS2Q06350 511 aa5.55□□□□□ -1.52
VPS72YDR485C MRPL35Q06678 367 aa5.55□□□□□ -1.52
VPS72YDR485C SUT2Q12286 268 aa5.55□□□□□ -1.52
VPS72YDR485C TRP3P00937 484 aa5.54□□□□□ -1.52
VPS72YDR485C FUS3P16892 353 aaKnown RBP5.54□□□□□ -1.52
VPS72YDR485C HXT1P32465 570 aa5.54□□□□□ -1.52
VPS72YDR485C PAC11P40960 533 aa5.54□□□□□ -1.52
VPS72YDR485C PMT6P42934 759 aa5.54□□□□□ -1.52
VPS72YDR485C BNA6P43619 295 aa5.54□□□□□ -1.52
VPS72YDR485C YDL186WP48568 277 aa5.54□□□□□ -1.52
VPS72YDR485C MRPL22P53881 309 aa5.54□□□□□ -1.52
VPS72YDR485C YNL146WP53906 100 aa5.54□□□□□ -1.52
VPS72YDR485C RRN11Q04712 507 aa5.54□□□□□ -1.52
VPS72YDR485C THI72Q08579 599 aa5.54□□□□□ -1.52
VPS72YDR485C PEX27Q08580 376 aa5.54□□□□□ -1.52
VPS72YDR485C ARG4P04076 463 aaPredicted RBP5.53□□□□□ -1.52
VPS72YDR485C CDC21P06785 304 aa5.53□□□□□ -1.52
VPS72YDR485C CLB2P24869 491 aa5.53□□□□□ -1.52
VPS72YDR485C YKL023WP36103 277 aaKnown RBP5.53□□□□□ -1.52
VPS72YDR485C KAE1P36132 386 aa5.53□□□□□ -1.52
VPS72YDR485C INM1P38710 295 aa5.53□□□□□ -1.52
VPS72YDR485C YJL118WP47022 219 aa5.53□□□□□ -1.52
VPS72YDR485C YJR011CP47086 261 aaPredicted RBP5.53□□□□□ -1.52
VPS72YDR485C ZPR1P53303 486 aaKnown RBP5.53□□□□□ -1.52
VPS72YDR485C COX20Q04935 205 aa5.53□□□□□ -1.52
VPS72YDR485C PDR8Q06149 701 aa5.53□□□□□ -1.52
VPS72YDR485C GPN3Q06543 272 aa5.53□□□□□ -1.52
VPS72YDR485C RAP1P11938 827 aa5.53□□□□□ -1.52
VPS72YDR485C FET3P38993 636 aa5.53□□□□□ -1.52
VPS72YDR485C YAR1P46683 200 aa5.53□□□□□ -1.52
VPS72YDR485C LYS20P48570 428 aaKnown RBP5.53□□□□□ -1.52
VPS72YDR485C UBP8P50102 471 aa5.53□□□□□ -1.52
VPS72YDR485C BUD32P53323 261 aa5.53□□□□□ -1.52
VPS72YDR485C YNL260CP53846 198 aa5.53□□□□□ -1.52
VPS72YDR485C LSP1Q12230 341 aaKnown RBP5.53□□□□□ -1.52
VPS72YDR485C IKI3Q06706 1349 aaKnown RBP5.53□□□□□ -1.52
VPS72YDR485C WHI2P12611 486 aa5.52□□□□□ -1.53
VPS72YDR485C APA2P22108 325 aa5.52□□□□□ -1.53
VPS72YDR485C RPI1P23250 407 aaKnown RBP5.52□□□□□ -1.53
VPS72YDR485C DBR1P24309 405 aaKnown RBP5.52□□□□□ -1.53
VPS72YDR485C BNA4P38169 460 aa5.52□□□□□ -1.53
VPS72YDR485C MIT1P40002 666 aa5.52□□□□□ -1.53
VPS72YDR485C YFL015CP43578 164 aa5.52□□□□□ -1.53
VPS72YDR485C ATG26Q06321 1198 aa5.52□□□□□ -1.53
VPS72YDR485C TDH3P00359 332 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VPS72YDR485C GDH1P07262 454 aaKnown RBP5.52□□□□□ -1.53
VPS72YDR485C GSY2P27472 705 aa5.52□□□□□ -1.53
VPS72YDR485C ACH1P32316 526 aa5.52□□□□□ -1.53
VPS72YDR485C RPC25P35718 212 aa5.52□□□□□ -1.53
VPS72YDR485C UBA4P38820 440 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms