RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	GMC2	Q06201	188 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	RIF2	Q06208	395 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	PSR1	Q07800	427 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	YOL159C	Q08300	171 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	SGT1	Q08446	395 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	MUM3	Q08750	479 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	HUA2	Q12134	243 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	NSL1	Q12143	216 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	PSY3	Q12318	242 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	SAS5	Q99314	248 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	UBR1	P19812	1950 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	HEM2	P05373	342 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	PHO81	P17442	1178 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	UGA1	P17649	471 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	RPB4	P20433	221 aa	Predicted RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	URE2	P23202	354 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	RVS161	P25343	265 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	DCC1	P25559	380 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	SPB1	P25582	841 aa	Predicted RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	PHO91	P27514	894 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	PTP2	P29461	750 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	MF(ALPHA)2	P32435	120 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	DAL3	P32459	195 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	KAR9	P32526	644 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	IMP3	P32899	183 aa	Predicted RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	SKT5	P34226	696 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	GCS1	P35197	352 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	ROT2	P38138	954 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	SRP72	P38688	640 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	ARP1	P38696	384 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	CYC2	P38909	366 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	ARB1	P40024	610 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	RGI2	P40188	164 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	MET18	P40469	1032 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	IMA5	P40884	581 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	TES1	P41903	349 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	GCN20	P43535	752 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	GCD14	P46959	383 aa	Predicted RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	SAP4	P53036	818 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	RMR1	P53060	241 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	YGR054W	P53235	642 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	YNL018C	P53976	612 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	HEL2	Q05580	639 aa	Known RBP	4.88	□□□□□ -1.63
TRS23	YDR246W	ULA1	Q12059	462 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	ICT1	Q12385	394 aa		4.88	□□□□□ -1.63
TRS23	YDR246W	SEM1	O94742	89 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	COR1	P07256	457 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	BCY1	P07278	416 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	COS2	P0CX12	379 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	COS3	P0CX13	379 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	SEC63	P14906	663 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	GUK1	P15454	187 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	STE4	P18851	423 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	KGD2	P19262	463 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	PMA2	P19657	947 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	CNA1	P23287	553 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	RBK1	P25332	333 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	CIN8	P27895	1000 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	UIP5	P36137	443 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	SKG1	P36169	355 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	MAK5	P38112	773 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	CDS1	P38221	457 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	GND1	P38720	489 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	FAA2	P39518	744 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	CAB2	P40506	365 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	YRB1	P41920	201 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	COS4	P43542	379 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	BST1	P43571	1029 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	PTR3	P43606	678 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	BUD13	P46947	266 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	EMC2	P47133	292 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	PRP24	P49960	444 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	DIA3	P52290	468 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	EFM5	P53200	248 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	CLD1	P53264	445 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	TMA20	P89886	181 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	YML131W	Q03102	365 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	NHP10	Q03435	203 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	SMP3	Q04174	516 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	RCO1	Q04779	684 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	MRI1	Q06489	411 aa	Known RBP	4.87	□□□□□ -1.63
TRS23	YDR246W	YLR413W	Q06689	675 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	YLR049C	Q12110	428 aa		4.87	□□□□□ -1.63
TRS23	YDR246W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
TRS23	YDR246W	ARG3	P05150	338 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	RHO1	P06780	209 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	ADE5,7	P07244	802 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	ATP1	P07251	545 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	HOM2	P13663	365 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	RAD51	P25454	400 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	HXT4	P32467	576 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	VPH1	P32563	840 aa	Known RBP	4.86	□□□□□ -1.63
TRS23	YDR246W	MTC7	P32633	139 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	ORC2	P32833	620 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	FRE2	P36033	711 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	YKR015C	P36111	568 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	CAF4	P36130	643 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	EFM1	P38732	585 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	FAD1	P38913	306 aa		4.86	□□□□□ -1.63
TRS23	YDR246W	UFE1	P41834	346 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms