RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 RSPH10BP0C881 870 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 UBA1P22314 1058 aaKnown RBP11.61□□□□□ -0.55
PHGDH-222ENST00000641587 HTRA4P83105 476 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-222ENST00000641587 SLC35G1Q2M3R5 365 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 EPC2Q52LR7 807 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 PLEKHG4Q58EX7 1191 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 CELF3Q5SZQ8 465 aaKnown RBP11.61□□□□□ -0.55
PHGDH-222ENST00000641587 SERINC5Q86VE9 423 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-222ENST00000641587 ANKS1AQ92625 1134 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 TELO2Q9Y4R8 837 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 INSL6Q9Y581 213 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 TREHO43280 583 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 AMHP03971 560 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 SMIM10L2AP0DMW4 78 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 SMIM10L2BP0DMW5 78 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 PGM5Q15124 567 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 ALYREFQ86V81 257 aaKnown RBP11.6□□□□□ -0.55
PHGDH-222ENST00000641587 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 ATP6V0A1Q93050 837 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 MRPL38Q96DV4 380 aaKnown RBP11.6□□□□□ -0.55
PHGDH-222ENST00000641587 UIMC1Q96RL1 719 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 AMNQ9BXJ7 453 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
PHGDH-222ENST00000641587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-222ENST00000641587 C17orf102A2RUQ5 167 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 PRR33A8MZF0 331 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 CSPG5O95196 566 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 LGALS2P05162 132 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 HOXC8P31273 242 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 GHRHRQ02643 423 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 GPM6BQ13491 265 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 STOX1Q6ZVD7 989 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 TRIM50Q86XT4 487 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 HOMER1Q86YM7 354 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 MTMR8Q96EF0 704 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 YME1L1Q96TA2 773 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 MAF1Q9H063 256 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 LSG1Q9H089 658 aaKnown RBP11.59□□□□□ -0.55
PHGDH-222ENST00000641587 RNPEPQ9H4A4 650 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 TRIOO75962 3097 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 RALGAPA2Q2PPJ7 1873 aa11.59□□□□□ -0.55
PHGDH-222ENST00000641587 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 H3BNC9 293 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 H3BRB1 525 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 PPFIA4O75335 1185 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 PTH1RQ03431 593 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 TIGD5Q53EQ6 642 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 CCDC178Q5BJE1 867 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 IFIT1BQ5T764 474 aaKnown RBP11.58□□□□□ -0.56
PHGDH-222ENST00000641587 CYB5R4Q7L1T6 521 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 VSIG10LQ86VR7 867 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 FCHSD1Q86WN1 690 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 TOP1MTQ969P6 601 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 C22orf23Q9BZE7 217 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 TUT1Q9H6E5 874 aaKnown RBP11.58□□□□□ -0.56
PHGDH-222ENST00000641587 MLXIPQ9HAP2 919 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 COL4A6Q14031 1691 aa11.58□□□□□ -0.56
PHGDH-222ENST00000641587 ZBTB5O15062 677 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 CCND2P30279 289 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 ZP2Q05996 745 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 SEC23AQ15436 765 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 CLUL1Q15846 466 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 PTPROQ16827 1216 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 SEPT8Q92599 483 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
PHGDH-222ENST00000641587 PIGSQ96S52 555 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 UBAC1Q9BSL1 405 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 DSCC1Q9BVC3 393 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 USP26Q9BXU7 913 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 IFIH1Q9BYX4 1025 aaKnown RBP11.57□□□□□ -0.56
PHGDH-222ENST00000641587 SENP2Q9HC62 589 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 SETD4Q9NVD3 440 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 CLDND1Q9NY35 253 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 RBM8AQ9Y5S9 174 aaKnown RBP11.57□□□□□ -0.56
PHGDH-222ENST00000641587 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-222ENST00000641587 PIEZO1Q92508 2521 aa11.57□□□□□ -0.56
PHGDH-222ENST00000641587 DCXO43602 365 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 CYTH3O43739 400 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 LINC00271P0C7V0 271 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 CTNNB1P35222 781 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 LTBRP36941 435 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 MRPS9P82933 396 aaKnown RBP11.56□□□□□ -0.56
PHGDH-222ENST00000641587 SP4Q02446 784 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 DLX2Q07687 328 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-222ENST00000641587 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
PHGDH-222ENST00000641587 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
PHGDH-222ENST00000641587 KCNV1Q6PIU1 500 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
PHGDH-222ENST00000641587 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms