RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CASC1Q6TDU7 716 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 NFXL1Q6ZNB6 911 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 CYFIP1Q7L576 1253 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 SAMD3Q8N6K7 520 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 SMARCC2Q8TAQ2 1214 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 INPP4AQ96PE3 977 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-213ENST00000641272 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-213ENST00000641272 TRANK1O15050 2925 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 hCG_1642624A0A1W2PR95 340 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 PPFIA4O75335 1185 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 DDAH1O94760 285 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 GNPTABQ3T906 1256 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 ATP6V0A1Q93050 837 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
PHGDH-213ENST00000641272 SPZ1Q9BXG8 430 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 LRRC2Q9BYS8 371 aa19.28■□□□□ 0.68
PHGDH-213ENST00000641272 SEC63Q9UGP8 760 aaKnown RBP19.28■□□□□ 0.68
PHGDH-213ENST00000641272 H3BRB1 525 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 SH2B2O14492 632 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 TREHO43280 583 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 LGR5O75473 907 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 PARNO95453 639 aaKnown RBP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 TGFB3P10600 412 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 SERINC5Q86VE9 423 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 SKAP1Q86WV1 359 aa19.27■□□□□ 0.68
PHGDH-213ENST00000641272 LSG1Q9H089 658 aaKnown RBP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 TUT1Q9H6E5 874 aaKnown RBP19.27■□□□□ 0.68
PHGDH-213ENST00000641272 ABHD14A-ACY1A0A1B0GW23 586 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 FIBPO43427 364 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 LPXNO60711 386 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 GJB5O95377 273 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 KIF5BP33176 963 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 METTL7BQ6UX53 244 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 MYOCDQ8IZQ8 938 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 SRBD1Q8N5C6 995 aaKnown RBP19.26■□□□□ 0.67
PHGDH-213ENST00000641272 CUL5Q93034 780 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 GPR20Q99678 358 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 OSBPL7Q9BZF2 842 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 PKD2L1Q9P0L9 805 aa19.26■□□□□ 0.67
PHGDH-213ENST00000641272 MUC3AQ02505 3323 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 LINC01553A4QN01 128 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 RSPH10B2B2RC85 870 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 SLC27A2O14975 620 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 RSPH10BP0C881 870 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 ICAM3P32942 547 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 IKBKEQ14164 716 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 UBE2SQ16763 222 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 DBF4BQ8NFT6 615 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 RNPEPQ9H4A4 650 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 SETD4Q9NVD3 440 aa19.25■□□□□ 0.67
PHGDH-213ENST00000641272 SPATA31C2B4DYI2 1134 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 MEIS2O14770 477 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 HOXC8P31273 242 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 MCM5P33992 734 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 NEDD9Q14511 834 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 CCDC82Q8N4S0 544 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 ESYT1Q9BSJ8 1104 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 ANO2Q9NQ90 1003 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 NLRC5Q86WI3 1866 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 EMSYQ7Z589 1322 aa19.24■□□□□ 0.67
PHGDH-213ENST00000641272 EFCAB14O75071 495 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 STAM2O75886 525 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 POU3F3P20264 500 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-213ENST00000641272 ARHGAP4P98171 946 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 PCNX4Q63HM2 1172 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 CREB3L3Q68CJ9 461 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 MAP3K14Q99558 947 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 RAD9AQ99638 391 aa19.23■□□□□ 0.67
PHGDH-213ENST00000641272 ZNF215Q9UL58 517 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-213ENST00000641272 XIRP2A4UGR9 3374 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 LMBR1Q8WVP7 490 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 TMEM87BQ96K49 555 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
PHGDH-213ENST00000641272 C17orf80Q9BSJ5 609 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 USP26Q9BXU7 913 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 KAT6AQ92794 2004 aa19.22■□□□□ 0.67
PHGDH-213ENST00000641272 PIK3CDO00329 1044 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 AMHP03971 560 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 BMP1P13497 986 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 MARK3P27448 753 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-213ENST00000641272 PLEKHG4Q58EX7 1191 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 HEATR3Q7Z4Q2 680 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 NLRX1Q86UT6 975 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 TCEANC2Q96MN5 208 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 SUGCTQ9HAC7 445 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 RAPGEFL1Q9UHV5 662 aa19.21■□□□□ 0.67
PHGDH-213ENST00000641272 ATP9AO75110 1047 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 TCF7P36402 384 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-213ENST00000641272 GNAQP50148 359 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 ERVK-21P61565 698 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 AAK1Q2M2I8 961 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 RUFY4Q6ZNE9 571 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 TMTC3Q6ZXV5 915 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 SEPT8Q92599 483 aa19.2■□□□□ 0.66
PHGDH-213ENST00000641272 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms