RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 HSF2BPO75031 334 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 HEXIM1O94992 359 aaKnown RBP16.1■□□□□ 0.17
SCARB2-221ENST00000640341 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 ADAM9Q13443 819 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 PURBQ96QR8 312 aaKnown RBP16.1■□□□□ 0.17
SCARB2-221ENST00000640341 SPAG5Q96R06 1193 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
SCARB2-221ENST00000640341 CNTNAP4Q9C0A0 1308 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-221ENST00000640341 GLI1P08151 1106 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 LRRC63Q05C16 580 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCARB2-221ENST00000640341 USH1GQ495M9 461 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 HAUS3Q68CZ6 603 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 A0A087X0T9 212 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 FAM228BP0C875 321 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 FIGNQ5HY92 759 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
SCARB2-221ENST00000640341 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
SCARB2-221ENST00000640341 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 SNED1Q8TER0 1413 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 TMCO5BA8MYB1 307 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 EDIL3O43854 480 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 TLR2O60603 784 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 FAM153BP0C7A2 387 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PLCG2P16885 1265 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PDCLQ13371 301 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 FAM153CQ494X1 144 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 PRR5LQ6MZQ0 368 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 HAS1Q92839 578 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 CUL5Q93034 780 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 FAM153AQ9UHL3 310 aa16.09■□□□□ 0.17
SCARB2-221ENST00000640341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 CAPS2Q9BXY5 557 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 RIOX1Q9H6W3 641 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 CASZ1Q86V15 1759 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 PLA2G4BP0C869 781 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 PRR16Q569H4 304 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 AENQ8WTP8 325 aaKnown RBP16.08■□□□□ 0.16
SCARB2-221ENST00000640341 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
SCARB2-221ENST00000640341 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 KCNK3O14649 394 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 NR2F2P24468 414 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
SCARB2-221ENST00000640341 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 MICALL1Q8N3F8 863 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 TTLL1O95922 423 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 LIG3P49916 1009 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 CDK17Q00537 523 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
SCARB2-221ENST00000640341 MMGT1Q8N4V1 131 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 TSPYL1Q9H0U9 437 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-221ENST00000640341 PCDHA1Q9Y5I3 950 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
SCARB2-221ENST00000640341 SLC9A1P19634 815 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 HPDP32754 393 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-221ENST00000640341 IRAK1P51617 712 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 CASP5P51878 434 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 EPHB4P54760 987 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 AP1M1Q9BXS5 423 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 IRS2Q9Y4H2 1338 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 PNMA6FA0A0J9YX94 578 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 CLIC2O15247 247 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 CFAP58Q5T655 872 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 BARGINQ6ZT62 677 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 TAF4BQ92750 862 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 NOL4O94818 638 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 PSMC6P62333 389 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 ASIC2Q16515 512 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 IKZF4Q9H2S9 585 aa16.06■□□□□ 0.16
SCARB2-221ENST00000640341 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCARB2-221ENST00000640341 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms