RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 RANBP17Q9H2T7 1088 aaKnown RBP12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 BAHCC1Q9P281 2608 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 CAND2O75155 1236 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 BRD1O95696 1058 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 CHGBP05060 677 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 ITGB1P05556 798 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 DNAJB1P25685 340 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 SLC16A2P36021 539 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 TRMT2AQ8IZ69 625 aaKnown RBP12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 SPPL3Q8TCT6 385 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 POF1BQ8WVV4 589 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 CLEC4DQ8WXI8 215 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
PTP4A1-207ENST00000639568 BAZ2AQ9UIF9 1905 aaKnown RBP12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 PER2O15055 1255 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 PPFIA4O75335 1185 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 STXBP2Q15833 593 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 SYDE2Q5VT97 1194 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 FLCNQ8NFG4 579 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 HAUS7Q99871 368 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 DLL3Q9NYJ7 618 aa12.96□□□□□ -0.33
PTP4A1-207ENST00000639568 MICAL3Q7RTP6 2002 aa12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 HIC1Q14526 733 aa12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 NSUN6Q8TEA1 469 aaKnown RBP12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 CDCA3Q99618 268 aaPredicted RBP12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
PTP4A1-207ENST00000639568 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 ATP5JP18859 108 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 GNAT2P19087 354 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 OSBPL7Q9BZF2 842 aa12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
PTP4A1-207ENST00000639568 ATRXP46100 2492 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 TREHO43280 583 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 DGKIO75912 1065 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 GNAT1P11488 350 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 SDHBP21912 280 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 TECP42680 631 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 RBM10P98175 930 aaKnown RBP12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 RSPO4Q2I0M5 234 aaPredicted RBP12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 RUBCNQ92622 972 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 APOL5Q9BWW9 433 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 RC3H2Q9HBD1 1191 aaKnown RBP12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 GPCPD1Q9NPB8 672 aa12.93□□□□□ -0.34
PTP4A1-207ENST00000639568 ENPP3O14638 875 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 COL9A2Q14055 689 aaPredicted RBP12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 ANKRD54Q6NXT1 300 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 CEP85Q6P2H3 762 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 CMTR2Q8IYT2 770 aaKnown RBP12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 S1PR5Q9H228 398 aa12.92□□□□□ -0.34
PTP4A1-207ENST00000639568 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 H3BRB1 525 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 SORBS3O60504 671 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 GHRP10912 638 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 HOXB8P17481 243 aaPredicted RBP12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 AOC1P19801 751 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 DUSP6Q16828 381 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 USH1GQ495M9 461 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 ARHGEF16Q5VV41 709 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 KIAA0319Q5VV43 1072 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 ZKSCAN2Q63HK3 967 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
PTP4A1-207ENST00000639568 ZC3H14Q6PJT7 736 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms