RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TBC1D5Q92609 795 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 SHTN1A0MZ66 631 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 NKRFO15226 690 aaKnown RBP eCLIP21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 ZNF280AP59817 542 aaPredicted RBP21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 KIF4BQ2VIQ3 1234 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 VWA3BQ502W6 1294 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 ARSHQ5FYA8 562 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 LZTFL1Q9NQ48 299 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 DNM3Q9UQ16 869 aa21.9■■□□□ 1.1
PCDHB11-202ENST00000624887 PHF20L1A8MW92 1017 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 TRIM21P19474 475 aaKnown RBP21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 RASA3Q14644 834 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 TSR1Q2NL82 804 aaKnown RBP21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 ACRBPQ8NEB7 543 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 IQCDQ96DY2 449 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 CHP1Q99653 195 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 ATAD5Q96QE3 1844 aa21.89■■□□□ 1.09
PCDHB11-202ENST00000624887 NPHP3-ACAD11A0A0J9YXS1 232 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 MEA1Q16626 185 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 MAN2A1Q16706 1144 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 SYT2Q8N9I0 419 aaPredicted RBP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 POLR3CQ9BUI4 534 aaPredicted RBP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 NDST4Q9H3R1 872 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 FBXO28Q9NVF7 368 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 A0A0U1RQJ8 604 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 A0A1W2PQJ5 194 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 KLK7P49862 253 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 ZBED6P86452 979 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 FKBP3Q00688 224 aaKnown RBP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 HERC4Q5GLZ8 1057 aaPredicted RBP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 WDR59Q6PJI9 974 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 KCTD17Q8N5Z5 321 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 ATRIPQ8WXE1 791 aa21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 V9GYY5 206 aaPredicted RBP21.88■■□□□ 1.09
PCDHB11-202ENST00000624887 KIF5CO60282 957 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 RPS12P25398 132 aaKnown RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 PSMC6P62333 389 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 MAP3K9P80192 1104 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 RASSF7Q02833 373 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 TNFAIP1Q13829 316 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 LDHDQ86WU2 507 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 TEPSINQ96N21 525 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 WDR18Q9BV38 432 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 FGFBP2Q9BYJ0 223 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 IRX2Q9BZI1 471 aaPredicted RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 DEFB129Q9H1M3 183 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 EHMT1Q9H9B1 1298 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 AGPAT5Q9NUQ2 364 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 CGNQ9P2M7 1197 aaKnown RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 EPN1Q9Y6I3 576 aaPredicted RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 MEIS1O00470 390 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 KIF20AO95235 890 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 NDUFA10O95299 355 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 KRT18P05783 430 aaKnown RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 ZNF341Q9BYN7 854 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 TBC1D7Q9P0N9 293 aa21.87■■□□□ 1.09
PCDHB11-202ENST00000624887 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 PABPC4Q13310 644 aaKnown RBP eCLIP21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 GIT2Q14161 759 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 ELF2Q15723 593 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 ARHGAP29Q52LW3 1261 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 LRRN4CLQ8ND94 238 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 PCMTD1Q96MG8 357 aaPredicted RBP21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 FEZ1Q99689 392 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 EIF2AK1Q9BQI3 630 aaKnown RBP21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 SLF1Q9BQI6 1058 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 SIK3Q9Y2K2 1263 aa21.86■■□□□ 1.09
PCDHB11-202ENST00000624887 EML1O00423 815 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 OTOP1Q7RTM1 612 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 SMAP1Q8IYB5 467 aaPredicted RBP21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 SCFD1Q8WVM8 642 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 CEP63Q96MT8 703 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 EMILIN3Q9NT22 766 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 COL4A3BPQ9Y5P4 624 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 TRAF5O00463 557 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 PSMD10O75832 226 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 EGFRP00533 1210 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 RAD51AP2Q09MP3 1159 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 ZNF397Q8NF99 534 aaPredicted RBP21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 SLC5A5Q92911 643 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 KCTD10Q9H3F6 313 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 GINM1Q9NU53 330 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 SCAF8Q9UPN6 1271 aaKnown RBP21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 MRFAP1Q9Y605 127 aa21.85■■□□□ 1.09
PCDHB11-202ENST00000624887 ICAM1P05362 532 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 INPP5BP32019 993 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 ARHGAP25P42331 645 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 PRELPP51888 382 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 CYP4A11Q02928 519 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 PPP2R5CQ13362 524 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 CEP55Q53EZ4 464 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 LPAR1Q92633 364 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 HSD17B14Q9BPX1 270 aa21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 ZNHIT6Q9NWK9 470 aaKnown RBP21.84■■□□□ 1.09
PCDHB11-202ENST00000624887 WDR46O15213 610 aaKnown RBP21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 EYA4O95677 639 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 LRCH2Q5VUJ6 765 aa21.83■■□□□ 1.09
PCDHB11-202ENST00000624887 SAMD1Q6SPF0 538 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms