RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 WDR4P57081 412 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 TIMM10P62072 90 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 ZNF200P98182 395 aaPredicted RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 IKBKEQ14164 716 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 MBTPS1Q14703 1052 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 LRRFIP1Q32MZ4 808 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 SNRNP48Q6IEG0 339 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 RBM23Q86U06 439 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 FBXO16Q8IX29 292 aaPredicted RBP8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 YME1L1Q96TA2 773 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 SRCIN1Q9C0H9 1055 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 SERPINB13Q9UIV8 391 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 ANGPTL2Q9UKU9 493 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 SORCS3Q9UPU3 1222 aa8.4□□□□□ -1.06
SCAMP1-206ENST00000618166 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
SCAMP1-206ENST00000618166 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.07
SCAMP1-206ENST00000618166 MAN1A2O60476 641 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 IGHA1P01876 353 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 NRIP1P48552 1158 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 CHMP4BP1P59074 171 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 KRT76Q01546 638 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 TAPT1Q6NXT6 567 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 ATF7IPQ6VMQ6 1270 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 EFHBQ8N7U6 833 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 VN1R2Q8NFZ6 395 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 AFAP1L1Q8TED9 768 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 PSMG3-AS1Q96PY0 264 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 APOL5Q9BWW9 433 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 NOD1Q9Y239 953 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
SCAMP1-206ENST00000618166 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 APAF1O14727 1248 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 AMHP03971 560 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 PROS1P07225 676 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 C1QTNF9P0C862 333 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 PLCD1P51178 756 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 RING1Q06587 406 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 PTGISQ16647 500 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 WNT8BQ93098 351 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 NOL10Q9BSC4 688 aaKnown RBP8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 DNMT3AQ9Y6K1 912 aaPredicted RBP8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 NLRC5Q86WI3 1866 aa8.38□□□□□ -1.07
SCAMP1-206ENST00000618166 C2CD4DB7Z1M9 353 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 C5orf67F2Z3F1 127 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 WDR46O15213 610 aaKnown RBP8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 BAG3O95817 575 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 MMP1P03956 469 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 CKBP12277 381 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 SDHBP21912 280 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 PMLP29590 882 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 NFRKBQ6P4R8 1299 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 ANKRD35Q8N283 1001 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 SPATA5Q8NB90 893 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 BAP1Q92560 729 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 MTG1Q9BT17 334 aaPredicted RBP8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 TEX13BQ9BXU2 312 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 LMAN2LQ9H0V9 348 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 EHD4Q9H223 541 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 NCDNQ9UBB6 729 aa8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
SCAMP1-206ENST00000618166 PER2O15055 1255 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 EFCAB14O75071 495 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 SP9P0CG40 484 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 NCLP19338 710 aaKnown RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 TGM1P22735 817 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 COPB2P35606 906 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 BMPR1AP36894 532 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 FAM83BQ5T0W9 1011 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 NAA16Q6N069 864 aaPredicted RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 CPXCR1Q8N123 301 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 DBF4BQ8NFT6 615 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 NUP88Q99567 741 aaPredicted RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 C11orf84Q9BUA3 381 aaPredicted RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 PARD6AQ9NPB6 346 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 EVA1BQ9NVM1 165 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 PA2G4Q9UQ80 394 aaKnown RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 TMX2Q9Y320 296 aa8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 TRIP12Q14669 1992 aaPredicted RBP8.36□□□□□ -1.07
SCAMP1-206ENST00000618166 PRR5-ARHGAP8B1AHC4 643 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 ARHGAP8P85298 464 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 LMNB2Q03252 620 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms