RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SIP14410 1827 aa21.87■■□□□ 1.09
CDX1-202ENST00000616154 GJB5O95377 273 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 GRB10Q13322 594 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 IKBKEQ14164 716 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 SKIV2LQ15477 1246 aaKnown RBP21.86■■□□□ 1.09
CDX1-202ENST00000616154 AAK1Q2M2I8 961 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 SPRED2Q7Z698 418 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 SPZ1Q9BXG8 430 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 LY9Q9HBG7 655 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 EMSYQ7Z589 1322 aa21.86■■□□□ 1.09
CDX1-202ENST00000616154 SPATA31C2B4DYI2 1134 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 H3BRB1 525 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 LPXNO60711 386 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 LGR5O75473 907 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 DDAH1O94760 285 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 LGALS2P05162 132 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 BMP1P13497 986 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 TFF2Q03403 129 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 TSGA10IPQ3SY00 556 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 KRT40Q6A162 431 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 ZNF654Q8IZM8 581 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 TMEM87BQ96K49 555 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 RAD9AQ99638 391 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 TUT1Q9H6E5 874 aaKnown RBP21.85■■□□□ 1.09
CDX1-202ENST00000616154 BCAS3Q9H6U6 928 aa21.85■■□□□ 1.09
CDX1-202ENST00000616154 C17orf102A2RUQ5 167 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 SMARCA1P28370 1054 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 KIF5BP33176 963 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 MCM5P33992 734 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 THPOP40225 353 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 SEMA3FQ13275 785 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 NEDD9Q14511 834 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 METTL7BQ6UX53 244 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 CTCFLQ8NI51 663 aaPredicted RBP21.84■■□□□ 1.09
CDX1-202ENST00000616154 PIBF1Q8WXW3 757 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 COG5Q9UP83 839 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 BRWD1Q9NSI6 2320 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 KAT6AQ92794 2004 aa21.84■■□□□ 1.09
CDX1-202ENST00000616154 RSPH10B2B2RC85 870 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 NOP56O00567 594 aaKnown RBP21.83■■□□□ 1.09
CDX1-202ENST00000616154 SH2B2O14492 632 aaPredicted RBP21.83■■□□□ 1.09
CDX1-202ENST00000616154 FIBPO43427 364 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 PRC1O43663 620 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 RSPH10BP0C881 870 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 SMIM10L2AP0DMW4 78 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 SMIM10L2BP0DMW5 78 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 LIFRP42702 1097 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 MKRN4PQ13434 485 aaPredicted RBP21.83■■□□□ 1.09
CDX1-202ENST00000616154 COL9A3Q14050 684 aaPredicted RBP21.83■■□□□ 1.09
CDX1-202ENST00000616154 TMTC2Q8N394 836 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 ATP6V0A1Q93050 837 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.09
CDX1-202ENST00000616154 LZTS2Q9BRK4 669 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 USP26Q9BXU7 913 aa21.83■■□□□ 1.09
CDX1-202ENST00000616154 PIK3CDO00329 1044 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 RNF20Q5VTR2 975 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 PCNX4Q63HM2 1172 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 CYFIP1Q7L576 1253 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 SMARCC2Q8TAQ2 1214 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 CUL5Q93034 780 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 GPR20Q99678 358 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 MYL10Q9BUA6 226 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 LMCD1Q9NZU5 365 aa21.82■■□□□ 1.08
CDX1-202ENST00000616154 CAND2O75155 1236 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 KCNQ1P51787 676 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 ERVK-21P61565 698 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 USP17L6PQ6QN14 398 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 DBF4BQ8NFT6 615 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 GDPD5Q8WTR4 605 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 TGS1Q96RS0 853 aaKnown RBP21.81■■□□□ 1.08
CDX1-202ENST00000616154 RNPEPQ9H4A4 650 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 RTEL1Q9NZ71 1219 aa21.81■■□□□ 1.08
CDX1-202ENST00000616154 SEC63Q9UGP8 760 aaKnown RBP21.81■■□□□ 1.08
CDX1-202ENST00000616154 LINC01553A4QN01 128 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 MEIS2O14770 477 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 TREHO43280 583 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 GNAQP50148 359 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 PLEKHG4Q58EX7 1191 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDX1-202ENST00000616154 SGMS1Q86VZ5 419 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 KCNB2Q92953 911 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 SENP7Q9BQF6 1050 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 AMHP03971 560 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 GNAT1P11488 350 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 FAM117BQ6P1L5 589 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 HLA-CQ95604 372 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 NECAB3Q96P71 396 aaPredicted RBP21.8■■□□□ 1.08
CDX1-202ENST00000616154 SUGCTQ9HAC7 445 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 ZNF215Q9UL58 517 aaPredicted RBP21.8■■□□□ 1.08
CDX1-202ENST00000616154 INSL6Q9Y581 213 aa21.8■■□□□ 1.08
CDX1-202ENST00000616154 RBAK-RBAKDNI3L0D1 243 aa21.79■■□□□ 1.08
CDX1-202ENST00000616154 PLEKHA8P1O95397 391 aa21.79■■□□□ 1.08
CDX1-202ENST00000616154 NLRX1Q86UT6 975 aa21.79■■□□□ 1.08
CDX1-202ENST00000616154 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
CDX1-202ENST00000616154 MTUS1Q9ULD2 1270 aa21.79■■□□□ 1.08
CDX1-202ENST00000616154 CCDC69A6NI79 296 aa21.78■■□□□ 1.08
CDX1-202ENST00000616154 HTRA4P83105 476 aaPredicted RBP21.78■■□□□ 1.08
CDX1-202ENST00000616154 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms