RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 CNNM2Q9H8M5 875 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 PDGFCQ9NRA1 345 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 SAGE1Q9NXZ1 904 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 RABGAP1Q9Y3P9 1069 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 PCDHA1Q9Y5I3 950 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 V9GY48 417 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-209ENST00000613524 MCM3APO60318 1980 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 MYH4Q9Y623 1939 aa5.7□□□□□ -1.5
SYCP1-209ENST00000613524 MAST2Q6P0Q8 1798 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 RAD50Q92878 1312 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 FAM221BA6H8Z2 402 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 DDX39AO00148 427 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 FBXO24O75426 580 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ARHGEF6Q15052 776 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 C1orf216Q8TAB5 229 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 KIF2CQ99661 725 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 SLC26A6Q9BXS9 759 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 SENP6Q9GZR1 1112 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ZNF358Q9NW07 568 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 POLIQ9UNA4 740 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ZBTB43O43298 467 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ORC4O43929 436 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ZNF543Q08ER8 600 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 U2AF1L4Q8WU68 220 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 COPS5Q92905 334 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 SNX21Q969T3 373 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 SEC63Q9UGP8 760 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 EGFL7Q9UHF1 273 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ZNF214Q9UL59 606 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 TNFRSF10BO14763 440 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 NCLP19338 710 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 RGS2P41220 211 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 METAP2P50579 478 aaKnown RBP eCLIP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ATP1A2P50993 1020 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 AKAP17AQ02040 695 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 NECTIN1Q15223 517 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ALX1Q15699 326 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 JAKMIP3Q5VZ66 844 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 BRICD5Q6PL45 260 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 FILIP1Q7Z7B0 1213 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ETFBKMTQ8IXQ9 262 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 THAP11Q96EK4 314 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 ZFRQ96KR1 1074 aaKnown RBP5.69□□□□□ -1.5
SYCP1-209ENST00000613524 LY9Q9HBG7 655 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 TMPRSS4Q9NRS4 437 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 PDRG1Q9NUG6 133 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 KLK14Q9P0G3 267 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 GGT7Q9UJ14 662 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 FEM1BQ9UK73 627 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 CNPY2Q9Y2B0 182 aa5.69□□□□□ -1.5
SYCP1-209ENST00000613524 PHIPQ8WWQ0 1821 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 MYO7AQ13402 2215 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 MAPK4P31152 587 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 HOXA7P31268 230 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 ADCYAP1R1P41586 468 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 DAB2P98082 770 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 RTN1Q16799 776 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 RNF207Q6ZRF8 634 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 FBXO11Q86XK2 927 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 MB21D2Q8IYB1 491 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 GJA10Q969M2 543 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 ATP11BQ9Y2G3 1177 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 CYP46A1Q9Y6A2 500 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 CHD7Q9P2D1 2997 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 PTPRFP10586 1907 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 CYTH3O43739 400 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 PQBP1O60828 265 aaKnown RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 CDC27P30260 824 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 NAPAP54920 295 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 MFSD14CQ5VZR4 134 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 SRBD1Q8N5C6 995 aaKnown RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 EPS8L3Q8TE67 593 aaKnown RBP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 TAAR1Q96RJ0 339 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.68□□□□□ -1.5
SYCP1-209ENST00000613524 ACAD9Q9H845 621 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 JMJD4Q9H9V9 463 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 SLC38A10Q9HBR0 1119 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 TMEM260Q9NX78 707 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 VPS54Q9P1Q0 977 aa5.68□□□□□ -1.5
SYCP1-209ENST00000613524 IGKV6D-41A0A0C4DH26 115 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 CCNYL3P0C7X3 344 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 IFFO2Q5TF58 517 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 ARHGEF16Q5VV41 709 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 DHX32Q7L7V1 743 aaKnown RBP5.67□□□□□ -1.5
SYCP1-209ENST00000613524 CCDC83Q8IWF9 413 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 IGDCC4Q8TDY8 1250 aa5.67□□□□□ -1.5
SYCP1-209ENST00000613524 UBE2Q2Q8WVN8 375 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms