RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NNTQ13423 1086 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 TAF11Q15544 211 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 EMBQ6PCB8 327 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 NEK9Q8TD19 979 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 GREM2Q9H772 168 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 IGSF1Q8N6C5 1336 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 KRT1P04264 644 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 CCND2P30279 289 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 DNAJC24Q6P3W2 148 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 ZNF449Q6P9G9 518 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 BZW1Q7L1Q6 419 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 SEPT9Q9UHD8 586 aaPredicted RBP18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 USP21Q9UK80 565 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 PTPN22Q9Y2R2 807 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 MX2P20592 715 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 DPCR1Q3MIW9 517 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 RHOT2Q8IXI1 618 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 ADCY2Q08462 1091 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 C2orf54Q08AI8 447 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 IFNAR2P48551 515 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 RCN2Q14257 317 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 KRT39Q6A163 491 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 PDCD7Q8N8D1 485 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 TCP11Q8WWU5 503 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 ANO3Q9BYT9 981 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 NRBP1Q9UHY1 535 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 ANGPTL3Q9Y5C1 460 aa18.82■□□□□ 0.6
HMGXB3-206ENST00000613459 ZFYVE16Q7Z3T8 1539 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 MT-ND3P03897 115 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 C6orf118Q5T5N4 469 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 SNX25Q9H3E2 840 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 ENC1O14682 589 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 BBOX1O75936 387 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 RAPH1Q70E73 1250 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 FAM160B2Q86V87 743 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 SERPINI1Q99574 410 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 BEGAINQ9BUH8 593 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 LMNAP02545 664 aaKnown RBP18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 SEMA3FQ13275 785 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 PTPROQ16827 1216 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 MXD3Q9BW11 206 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 PACSIN2Q9UNF0 486 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 SCINQ9Y6U3 715 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 CYP4A11Q02928 519 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 LRRC43Q8N309 656 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 TLK1Q9UKI8 766 aa18.81■□□□□ 0.6
HMGXB3-206ENST00000613459 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 APOEP02649 317 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 PARD6BQ9BYG5 372 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 M0R2C6 588 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 ORC2Q13416 577 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 NHEJ1Q9H9Q4 299 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 CTNND1O60716 968 aaKnown RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 TMED2Q15363 201 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 ATG16L1Q676U5 607 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 DCPSQ96C86 337 aaKnown RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 PARVGQ9HBI0 331 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 PPEF1O14829 653 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 IFRD2Q12894 506 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 E2F5Q15329 346 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 GADL1Q6ZQY3 521 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 SLC38A10Q9HBR0 1119 aa18.8■□□□□ 0.6
HMGXB3-206ENST00000613459 NDUFA10O95299 355 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 OSBPP22059 807 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 DEUP1Q05D60 604 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 ANKRD13CQ8N6S4 541 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 CENPKQ9BS16 269 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 EMILIN3Q9NT22 766 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 GCNT4Q9P109 453 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 PCDHA13Q9Y5I0 950 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 IQANK1A0A1B0GTG1 560 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 DHX9Q08211 1270 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 ARHGEF6Q15052 776 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 DPY19L2Q6NUT2 758 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 MRPL46Q9H2W6 279 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 MAGI2Q86UL8 1455 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 GUCY2CP25092 1073 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 CLCN6P51797 869 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 PLTPP55058 493 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 RESTQ13127 1097 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 PRKG1Q13976 671 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 PODXLO00592 558 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 SLFN12LQ6IEE8 588 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 ATP8A1Q9Y2Q0 1164 aa18.79■□□□□ 0.6
HMGXB3-206ENST00000613459 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms