RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 CALCRLQ16602 461 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 CCDC40Q4G0X9 1142 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 CD302Q8IX05 232 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 MYCBPAPQ8TBZ2 947 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 PPANQ9NQ55 473 aaKnown RBP18.65■□□□□ 0.58
TNIP1-220ENST00000610535 CEP72Q9P209 647 aa18.65■□□□□ 0.58
TNIP1-220ENST00000610535 COL14A1Q05707 1796 aaKnown RBP18.64■□□□□ 0.57
TNIP1-220ENST00000610535 E7EVH7 732 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 FSBPO95073 299 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 HLTFQ14527 1009 aaKnown RBP eCLIP18.64■□□□□ 0.57
TNIP1-220ENST00000610535 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
TNIP1-220ENST00000610535 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 GJA10Q969M2 543 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 FGFBP2Q9BYJ0 223 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 SRP68Q9UHB9 627 aaKnown RBP18.64■□□□□ 0.57
TNIP1-220ENST00000610535 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 ABCB11O95342 1321 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 LAMB1P07942 1786 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 RASA1P20936 1047 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
TNIP1-220ENST00000610535 RAPGEF1Q13905 1077 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 RAD54LQ92698 747 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 STK17AQ9UEE5 414 aa18.64■□□□□ 0.57
TNIP1-220ENST00000610535 GRID2IPA4D2P6 1211 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 EDIL3O43854 480 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 ECM1Q16610 540 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 REXO1Q8N1G1 1221 aaKnown RBP18.63■□□□□ 0.57
TNIP1-220ENST00000610535 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 USP38Q8NB14 1042 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SNX29Q8TEQ0 813 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 WHAMMQ8TF30 809 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 CABS1Q96KC9 395 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 TSG101Q99816 390 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SPZ1Q9BXG8 430 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 PCDHGC5Q9Y5F6 944 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 COL4A3BPQ9Y5P4 624 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 MYH14Q7Z406 1995 aaKnown RBP18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 GRIK5Q16478 980 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SLC18A3Q16572 532 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 CCDC91Q7Z6B0 441 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 MAPKAPK5Q8IW41 473 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 MYOCDQ8IZQ8 938 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
TNIP1-220ENST00000610535 KCNK3O14649 394 aa18.62■□□□□ 0.57
TNIP1-220ENST00000610535 NELFCDQ8IXH7 590 aa18.62■□□□□ 0.57
TNIP1-220ENST00000610535 USP8P40818 1118 aa18.62■□□□□ 0.57
TNIP1-220ENST00000610535 FKBP3Q00688 224 aaKnown RBP18.62■□□□□ 0.57
TNIP1-220ENST00000610535 TMBIM4Q9HC24 238 aa18.62■□□□□ 0.57
TNIP1-220ENST00000610535 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
TNIP1-220ENST00000610535 HMGB1P1B2RPK0 211 aaPredicted RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 HSD17B3P37058 310 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 HSPA9P38646 679 aaKnown RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 KLHL30Q0D2K2 578 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 ZCWPW2Q504Y3 356 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 SPATS2Q86XZ4 545 aaKnown RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 COA7Q96BR5 231 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 JPH2Q9BR39 696 aaPredicted RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 RIC8AQ9NPQ8 531 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 ZNF652Q9Y2D9 606 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 FAM107AO95990 144 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 SSBP05455 408 aaKnown RBP eCLIP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 IBSPP21815 317 aaPredicted RBP18.61■□□□□ 0.57
TNIP1-220ENST00000610535 AP1M1Q9BXS5 423 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 CD248Q9HCU0 757 aa18.61■□□□□ 0.57
TNIP1-220ENST00000610535 BACH1O14867 736 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 ECHS1P30084 290 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.577e-6■■■■□ 23.7
TNIP1-220ENST00000610535 COASYQ13057 564 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 SYN2Q92777 582 aaPredicted RBP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 DNAJC19Q96DA6 116 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 LUC7LQ9NQ29 371 aaKnown RBP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 BCCIPQ9P287 314 aaKnown RBP eCLIP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 GSCP56915 257 aaPredicted RBP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 TNNC1P63316 161 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 CACNB1Q02641 598 aaPredicted RBP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 UAP1Q16222 522 aaPredicted RBP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 KRT79Q5XKE5 535 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 NEUROG2Q9H2A3 272 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 TMEM59LQ9UK28 342 aa18.6■□□□□ 0.57
TNIP1-220ENST00000610535 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
TNIP1-220ENST00000610535 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 CEP104O60308 925 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 MYBP10242 640 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 TMOD1P28289 359 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 RPS6KA1Q15418 735 aa18.59■□□□□ 0.57
TNIP1-220ENST00000610535 YTHDF3Q7Z739 585 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms