RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	SYTL3	Q4VX76	610 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SESTD1	Q86VW0	696 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TRIM42	Q8IWZ5	723 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	GGNBP2	Q9H3C7	697 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ZNF304	Q9HCX3	659 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	STOML2	Q9UJZ1	356 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CNPY2	Q9Y2B0	182 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	UBE4B	O95155	1302 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SMCO3	A2RU48	225 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ANP32D	O95626	131 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	BCR	P11274	1271 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	EIF2B5	Q13144	721 aa	Known RBP	4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PAK2	Q13177	524 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TDRD7	Q8NHU6	1098 aa	Known RBP	4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	MDM1	Q8TC05	714 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	INPP5D	Q92835	1189 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TMEM161A	Q9NX61	479 aa		4.41	□□□□□ -1.7
KCNMA1-223	ENST00000604624	GOLGA8T	H3BQL2	631 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ARHGAP6	O43182	974 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PRKAR2B	P31323	418 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	EIF2S3	P41091	472 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SLC16A1	P53985	500 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	MTMR3	Q13615	1198 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	WTAP	Q15007	396 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	RTL3	Q8N8U3	475 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	KCNG4	Q8TDN1	519 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CDKL2	Q92772	493 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	MMTAG2	Q9BU76	263 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ORC3	Q9UBD5	711 aa	Predicted RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624		M0QZ92	97 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	DDX39A	O00148	427 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CYP19A1	P11511	503 aa	Predicted RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CSE1L	P55060	971 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	KRT76	Q01546	638 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PWP1	Q13610	501 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	MSL3	Q8N5Y2	521 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	DNAAF3	Q8N9W5	541 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	UXS1	Q8NBZ7	420 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	BBS2	Q9BXC9	721 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	LRRC2	Q9BYS8	371 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SYNDIG1	Q9H7V2	258 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TBC1D7	Q9P0N9	293 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TTC3	P53804	2025 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	RGL2	O15211	777 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	STAM2	O75886	525 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	MAP4	P27816	1152 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ARF3	P61204	181 aa	Predicted RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	YWHAE	P62258	255 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ARF1	P84077	181 aa	Known RBP	4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CNGA2	Q16280	664 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PCGF5	Q86SE9	256 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ZNF507	Q8TCN5	953 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SMARCAD1	Q9H4L7	1026 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TRPC4	Q9UBN4	977 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	CAMTA1	Q9Y6Y1	1673 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SGK1	O00141	431 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TADA3	O75528	432 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	TNNI1	P19237	187 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	RAB3GAP1	Q15042	981 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ELMSAN1	Q6PJG2	1045 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	DTHD1	Q6ZMT9	781 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	KIAA0408	Q6ZU52	694 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	SERPINI1	Q99574	410 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	VPS16	Q9H269	839 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	PARP2	Q9UGN5	583 aa		4.4	□□□□□ -1.7
KCNMA1-223	ENST00000604624	ENO4	A6NNW6	628 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PEX1	O43933	1283 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	BRDT	Q58F21	947 aa	Predicted RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CDAN1	Q8IWY9	1227 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	UHMK1	Q8TAS1	419 aa	Known RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GIPC2	Q8TF65	315 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TUFT1	Q9NNX1	390 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SELENON	Q9NZV5	590 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYH14	Q7Z406	1995 aa	Known RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TTC21B	Q7Z4L5	1316 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624		A0A087WUV0	522 aa	Predicted RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNF103-CHMP3	A0A140T963	221 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	VWA3A	A6NCI4	1184 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TOM1L1	O75674	476 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GCNT3	O95395	438 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ARL3	P36405	182 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TNNI2	P48788	182 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	YWHAG	P61981	247 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GNGT1	P63211	74 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KRT79	Q5XKE5	535 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	POMGNT2	Q8NAT1	580 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KIF1BP	Q96EK5	621 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TNIP3	Q96KP6	325 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TMOD4	Q9NZQ9	345 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	L3MBTL1	Q9Y468	752 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SUN1	O94901	812 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MORF4L2	Q15014	288 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DENND6A	Q8IWF6	608 aa		4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNASE11	Q8TAA1	199 aa	Known RBP	4.4	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ALG1	Q9BT22	464 aa		4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms