RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 TRIM50Q86XT4 487 aa13.76□□□□□ -0.21
AC078880.3-201ENST00000603439 RBM28Q9NW13 759 aaKnown RBP13.76□□□□□ -0.21
AC078880.3-201ENST00000603439 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
AC078880.3-201ENST00000603439 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
AC078880.3-201ENST00000603439 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
AC078880.3-201ENST00000603439 VCANP13611 3396 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 NID2Q14112 1375 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 RBAK-RBAKDNI3L0D1 243 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 ZBTB43O43298 467 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 CKBP12277 381 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 MYOGP15173 224 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 FUT2Q10981 343 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 NEDD9Q14511 834 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 PPP2R2DQ66LE6 453 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 TRAF7Q6Q0C0 670 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 GPR20Q99678 358 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 PSTPIP2Q9H939 334 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
AC078880.3-201ENST00000603439 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 SMIM10L2AP0DMW4 78 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 SMIM10L2BP0DMW5 78 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 CPA1P15085 419 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 HOXC8P31273 242 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 SP4Q02446 784 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 PTK7Q13308 1070 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 GPNMBQ14956 572 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 NLRX1Q86UT6 975 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 KCNB2Q92953 911 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 PCDHA11Q9Y5I1 949 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 REV3LO60673 3130 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 TRANK1O15050 2925 aa13.74□□□□□ -0.21
AC078880.3-201ENST00000603439 C17orf102A2RUQ5 167 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 H3BRB1 525 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 STXBP3O00186 592 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 NBNO60934 754 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 CXCL10P02778 98 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 KCNA2P16389 499 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 ITGB5P18084 799 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 HSPA4P34932 840 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 RCAN1P53805 252 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 NAPAP54920 295 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 TCTN1Q2MV58 587 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 SERINC5Q86VE9 423 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 TUT1Q9H6E5 874 aaKnown RBP13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 KAT6AQ92794 2004 aa13.73□□□□□ -0.21
AC078880.3-201ENST00000603439 DLL1O00548 723 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 CA3P07451 260 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 CDC27P30260 824 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 ADCY7P51828 1080 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 WDR5P61964 334 aaKnown RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 MTMR1Q13613 665 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 CNKSR3Q6P9H4 555 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 SENP7Q9BQF6 1050 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 UBIAD1Q9Y5Z9 338 aa13.72□□□□□ -0.21
AC078880.3-201ENST00000603439 CUL9Q8IWT3 2517 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 MYO9BQ13459 2157 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 ATP9AO75110 1047 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 ARHGEF15O94989 841 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 KCNJ6P48051 423 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 DEFB103AP81534 67 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 FGD1P98174 961 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 APOBRQ0VD83 1088 aa13.71□□□□□ -0.21
AC078880.3-201ENST00000603439 Q6ZUG5 572 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms