RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 CHMP4BP1P59074 171 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 GUCY1B3Q02153 619 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 EARS2Q5JPH6 523 aaKnown RBP22.85■■□□□ 1.25
SSBP4-210ENST00000601444 KRT40Q6A162 431 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 SH3RF1Q7Z6J0 888 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 PLA2G4DQ86XP0 818 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 IL27Q8NEV9 243 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 HOXD8P13378 290 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-210ENST00000601444 NR5A1Q13285 461 aa22.84■■□□□ 1.25
SSBP4-210ENST00000601444 ITGB3BPQ13352 177 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-210ENST00000601444 NBPF20Q3BBV1 942 aa22.84■■□□□ 1.25
SSBP4-210ENST00000601444 ANKRD33Q7Z3H0 272 aa22.84■■□□□ 1.25
SSBP4-210ENST00000601444 GPR20Q99678 358 aa22.84■■□□□ 1.25
SSBP4-210ENST00000601444 MYH7BA7E2Y1 1941 aa22.84■■□□□ 1.25
SSBP4-210ENST00000601444 DOCK5Q9H7D0 1870 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 FAM205CA6NFA0 338 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 NOP56O00567 594 aaKnown RBP22.83■■□□□ 1.25
SSBP4-210ENST00000601444 PPFIA4O75335 1185 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 MMP1P03956 469 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 CIITAP33076 1130 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 MCM2P49736 904 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 FAAP100Q0VG06 881 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 INF2Q27J81 1249 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 PRR16Q569H4 304 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 NIPA1Q7RTP0 329 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 KRT25Q7Z3Z0 450 aa22.83■■□□□ 1.25
SSBP4-210ENST00000601444 GIMAP8Q8ND71 665 aaPredicted RBP22.83■■□□□ 1.25
SSBP4-210ENST00000601444 TRIM43BA6NCK2 446 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 BTBD18B2RXH4 712 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 KRT2P35908 639 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 USP11P51784 963 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 HMGN5P82970 282 aaKnown RBP22.82■■□□□ 1.24
SSBP4-210ENST00000601444 NONOQ15233 471 aaKnown RBP eCLIP22.82■■□□□ 1.24
SSBP4-210ENST00000601444 PRPF38BQ5VTL8 546 aaKnown RBP22.82■■□□□ 1.24
SSBP4-210ENST00000601444 PIK3AP1Q6ZUJ8 805 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 FAM126BQ8IXS8 530 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 LENG9Q96B70 501 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 TRIM43Q96BQ3 446 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-210ENST00000601444 TOX2Q96NM4 488 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 C16orf70Q9BSU1 422 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 TRPV6Q9H1D0 765 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 PRDM5Q9NQX1 630 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-210ENST00000601444 PDLIM7Q9NR12 457 aa22.82■■□□□ 1.24
SSBP4-210ENST00000601444 CCDC194A0A1B0GVG4 234 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 GSTTP1A0A1W2PQM5 241 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 TDP2O95551 362 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 TRIM29Q14134 588 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 FAM184AQ8NB25 1140 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 C8orf76Q96K31 380 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 PDE4DIPQ5VU43 2346 aa22.81■■□□□ 1.24
SSBP4-210ENST00000601444 DCDC2CA8MYV0 355 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 DDX39AO00148 427 aaKnown RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 DHX15O43143 795 aaKnown RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 B4GALT4O60513 344 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 F2P00734 622 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 CD4P01730 458 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 LGALS2P05162 132 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 CLTBP09497 229 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 ITGB8P26012 769 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 PSEN2P49810 448 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 FAM47CQ5HY64 1035 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 UTP14CQ5TAP6 766 aaKnown RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 TRIM50Q86XT4 487 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 DIS3L2Q8IYB7 885 aaKnown RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 GJA10Q969M2 543 aa22.8■■□□□ 1.24
SSBP4-210ENST00000601444 JPH1Q9HDC5 661 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 TRMT13Q9NUP7 481 aaKnown RBP22.8■■□□□ 1.24
SSBP4-210ENST00000601444 HAS3O00219 553 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 IPO5O00410 1097 aaKnown RBP22.79■■□□□ 1.24
SSBP4-210ENST00000601444 TCF7P36402 384 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-210ENST00000601444 MFSD10Q14728 455 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 KIAA0753Q2KHM9 967 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 SDF4Q9BRK5 362 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 ZNF577Q9BSK1 485 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 BRMS1Q9HCU9 246 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 TMEM39AQ9NV64 488 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 SLC9A2Q9UBY0 812 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 NFASCO94856 1347 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 MROH7Q68CQ1 1323 aa22.79■■□□□ 1.24
SSBP4-210ENST00000601444 CYP3A7-CYP3A51PA0A087WV96 503 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 MSH4O15457 936 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 CYP3A7P24462 503 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 SETQ01105 290 aaPredicted RBP22.78■■□□□ 1.24
SSBP4-210ENST00000601444 LETM2Q2VYF4 491 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 NFRKBQ6P4R8 1299 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 FBXO18Q8NFZ0 1043 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 SEPT1Q8WYJ6 367 aa22.78■■□□□ 1.24
SSBP4-210ENST00000601444 H3BRB1 525 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 CCNE2O96020 404 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 ACTR2P61160 394 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 MDM2Q00987 491 aaPredicted RBP22.77■■□□□ 1.24
SSBP4-210ENST00000601444 Q4G0T1 1027 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 NEK8Q86SG6 692 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 TUT1Q9H6E5 874 aaKnown RBP22.77■■□□□ 1.24
SSBP4-210ENST00000601444 HDAC6Q9UBN7 1215 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 PRKAG2Q9UGJ0 569 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 TBX21Q9UL17 535 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 SCN10AQ9Y5Y9 1956 aa22.77■■□□□ 1.24
SSBP4-210ENST00000601444 TLR3O15455 904 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms