RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CST5P28325 142 aaPredicted RBP21.7■■□□□ 1.06
DDX39A-214ENST00000590556 TRAPPC10P48553 1259 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 CPT1AP50416 773 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 METTL7BQ6UX53 244 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 FERMT3Q86UX7 667 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 AFG1LQ8WV93 481 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 DOCK5Q9H7D0 1870 aa21.7■■□□□ 1.06
DDX39A-214ENST00000590556 SLC37A4O43826 429 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 ZEB2O60315 1214 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 FARP2O94887 1054 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-214ENST00000590556 ITGB3BPQ13352 177 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-214ENST00000590556 KCNA10Q16322 511 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 BRAPQ7Z569 592 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 PCSK9Q8NBP7 692 aaKnown RBP21.69■■□□□ 1.06
DDX39A-214ENST00000590556 PPTC7Q8NI37 304 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 TBC1D22BQ9NU19 505 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 DAXXQ9UER7 740 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-214ENST00000590556 NFASCO94856 1347 aa21.69■■□□□ 1.06
DDX39A-214ENST00000590556 A6NJR5 290 aa21.68■■□□□ 1.06
DDX39A-214ENST00000590556 WNT7AO00755 349 aa21.68■■□□□ 1.06
DDX39A-214ENST00000590556 TTC38Q5R3I4 469 aa21.68■■□□□ 1.06
DDX39A-214ENST00000590556 CCSAPQ6IQ19 270 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-214ENST00000590556 TSEN34Q9BSV6 310 aaKnown RBP21.68■■□□□ 1.06
DDX39A-214ENST00000590556 JPH1Q9HDC5 661 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-214ENST00000590556 TSHZ2Q9NRE2 1034 aa21.68■■□□□ 1.06
DDX39A-214ENST00000590556 NOP56O00567 594 aaKnown RBP21.67■■□□□ 1.06
DDX39A-214ENST00000590556 MARCH6O60337 910 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 MMP3P08254 477 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 MCM7P33993 719 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 MNX1P50219 401 aaPredicted RBP21.67■■□□□ 1.06
DDX39A-214ENST00000590556 TOB1P50616 345 aaPredicted RBP21.67■■□□□ 1.06
DDX39A-214ENST00000590556 SP4Q02446 784 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 ZNF174Q15697 407 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 HSDL1Q3SXM5 330 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 RILPL1Q5EBL4 403 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 SLC5A5Q92911 643 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 SLC9A2Q9UBY0 812 aa21.67■■□□□ 1.06
DDX39A-214ENST00000590556 DDX39AO00148 427 aaKnown RBP21.66■■□□□ 1.06
DDX39A-214ENST00000590556 DHX15O43143 795 aaKnown RBP21.66■■□□□ 1.06
DDX39A-214ENST00000590556 NEMFO60524 1076 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 MYL3P08590 195 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 ACLYP53396 1101 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 RESTQ13127 1097 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 ORC2Q13416 577 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-214ENST00000590556 DGKDQ16760 1214 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 ETNPPLQ8TBG4 499 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 RIT2Q99578 217 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 ZSCAN16Q9H4T2 348 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-214ENST00000590556 KCNMB3Q9NPA1 279 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 POLR3EQ9NVU0 708 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 TCEAL9Q9UHQ7 104 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 PHF24Q9UPV7 400 aa21.66■■□□□ 1.06
DDX39A-214ENST00000590556 RBM19Q9Y4C8 960 aaKnown RBP21.66■■□□□ 1.06
DDX39A-214ENST00000590556 MOXD2PA6NHM9 499 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 TBX3O15119 743 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 KPNA6O60684 536 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 GAS7O60861 476 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 PPFIA4O75335 1185 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 BAG4O95429 457 aaKnown RBP21.65■■□□□ 1.06
DDX39A-214ENST00000590556 ASGR1P07306 291 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 NBR1Q14596 966 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 CALCRLQ16602 461 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 LRCH2Q5VUJ6 765 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 DIS3LQ8TF46 1054 aaKnown RBP21.65■■□□□ 1.06
DDX39A-214ENST00000590556 GJA10Q969M2 543 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 PAWRQ96IZ0 340 aaKnown RBP21.65■■□□□ 1.06
DDX39A-214ENST00000590556 FAM20AQ96MK3 541 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 GPR20Q99678 358 aa21.65■■□□□ 1.06
DDX39A-214ENST00000590556 ZSCAN22P10073 491 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-214ENST00000590556 FOXD4L5Q5VV16 416 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-214ENST00000590556 NECAB2Q7Z6G3 386 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 SLFN12Q8IYM2 578 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 FOXD4L4Q8WXT5 416 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-214ENST00000590556 HAS1Q92839 578 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 FERMT2Q96AC1 680 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 TEKT3Q9BXF9 490 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 C11orf49Q9H6J7 331 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 TELO2Q9Y4R8 837 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 PCDHB6Q9Y5E3 794 aa21.64■■□□□ 1.05
DDX39A-214ENST00000590556 PSMD10O75832 226 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 ACTR2P61160 394 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 KRT76Q01546 638 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 PKP1Q13835 747 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 CXCL17Q6UXB2 119 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 SEPT1Q8WYJ6 367 aa21.63■■□□□ 1.05
DDX39A-214ENST00000590556 MTG1Q9BT17 334 aaPredicted RBP21.63■■□□□ 1.05
DDX39A-214ENST00000590556 SENP6Q9GZR1 1112 aaPredicted RBP21.63■■□□□ 1.05
DDX39A-214ENST00000590556 A0A1W2PQ45 241 aaPredicted RBP21.62■■□□□ 1.05
DDX39A-214ENST00000590556 GSTTP1A0A1W2PQM5 241 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 A0A1W2PQY0 241 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 CAPN15O75808 1086 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 CABYRO75952 493 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 CCNE2O96020 404 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 COL6A1P12109 1028 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 HOXD8P13378 290 aaPredicted RBP21.62■■□□□ 1.05
DDX39A-214ENST00000590556 PURAQ00577 322 aaKnown RBP21.62■■□□□ 1.05
DDX39A-214ENST00000590556 ZNF746Q6NUN9 644 aaPredicted RBP21.62■■□□□ 1.05
DDX39A-214ENST00000590556 UBE2Q1Q7Z7E8 422 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 VTI1AQ96AJ9 217 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms