RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
CXXC1-213ENST00000590234 CEP290O15078 2479 aa16.67■□□□□ 0.26
CXXC1-213ENST00000590234 FAM86B1E9PN63 330 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 M0R2N6 131 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 MEIS1O00470 390 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 FAM86B2P0C5J1 330 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 ZNF286BP0CG31 522 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 SP4Q02446 784 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 FAAP100Q0VG06 881 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 NIPA1Q7RTP0 329 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 KAT2BQ92831 832 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 TMEM39AQ9NV64 488 aa16.66■□□□□ 0.26
CXXC1-213ENST00000590234 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 F2P00734 622 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 ARP10275 920 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 SETQ01105 290 aaPredicted RBP16.65■□□□□ 0.26
CXXC1-213ENST00000590234 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 KRT25Q7Z3Z0 450 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 SH3RF1Q7Z6J0 888 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
CXXC1-213ENST00000590234 GPR20Q99678 358 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
CXXC1-213ENST00000590234 PCDH10Q9P2E7 1040 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 LTBP2Q14767 1821 aa16.65■□□□□ 0.26
CXXC1-213ENST00000590234 IGLV3-22A0A075B6J6 115 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 KIAA0355O15063 1070 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 CD4P01730 458 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 CIITAP33076 1130 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 MAGEA10P43363 369 aaPredicted RBP16.64■□□□□ 0.25
CXXC1-213ENST00000590234 MCM2P49736 904 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 PSEN2P49810 448 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
CXXC1-213ENST00000590234 TRIM29Q14134 588 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 MFSD10Q14728 455 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 NONOQ15233 471 aaKnown RBP eCLIP16.64■□□□□ 0.25
CXXC1-213ENST00000590234 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
CXXC1-213ENST00000590234 NFASCO94856 1347 aa16.64■□□□□ 0.25
CXXC1-213ENST00000590234 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 B4GALT4O60513 344 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 CD2BP2O95400 341 aaKnown RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 LGALS2P05162 132 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 RAG1P15918 1043 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 KRT2P35908 639 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 USP11P51784 963 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 FOSBP53539 338 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 MDM2Q00987 491 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 PRR16Q569H4 304 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 PPP1R13LQ8WUF5 828 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 GDF15Q99988 308 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 LBHD1Q9BQE6 289 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 C16orf70Q9BSU1 422 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 SLC9A2Q9UBY0 812 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 TBX21Q9UL17 535 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 COLQQ9Y215 455 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-213ENST00000590234 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
CXXC1-213ENST00000590234 HAS3O00219 553 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 MMP1P03956 469 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 TCF7P36402 384 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-213ENST00000590234 ITGB3BPQ13352 177 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-213ENST00000590234 KRT40Q6A162 431 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 SESTD1Q86VW0 696 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 C7orf31Q8N865 590 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 SEPT1Q8WYJ6 367 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 ZNF577Q9BSK1 485 aa16.62■□□□□ 0.25
CXXC1-213ENST00000590234 ZNF215Q9UL58 517 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-213ENST00000590234 H3BRB1 525 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
CXXC1-213ENST00000590234 EDIL3O43854 480 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 INF2Q27J81 1249 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
CXXC1-213ENST00000590234 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 BADQ92934 168 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 LENG9Q96B70 501 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
CXXC1-213ENST00000590234 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
CXXC1-213ENST00000590234 GSTTP1A0A1W2PQM5 241 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 DDX39AO00148 427 aaKnown RBP16.6■□□□□ 0.25
CXXC1-213ENST00000590234 TIMP1P01033 207 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 ITGB8P26012 769 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 BMP8BP34820 402 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 NR5A1Q13285 461 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
CXXC1-213ENST00000590234 TRIM50Q86XT4 487 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms