RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FAM20AQ96MK3 541 aa22.17■■□□□ 1.14
CIRBP-220ENST00000588917 TCEAL9Q9UHQ7 104 aa22.17■■□□□ 1.14
CIRBP-220ENST00000588917 NR2E3Q9Y5X4 410 aa22.17■■□□□ 1.14
CIRBP-220ENST00000588917 ADCY6O43306 1168 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 ATP9AO75110 1047 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 C6orf222P0C671 652 aaPredicted RBP22.16■■□□□ 1.14
CIRBP-220ENST00000588917 KCNA2P16389 499 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 ATP2B1P20020 1258 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 GNASQ5JWF2 1037 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 TTC38Q5R3I4 469 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 SLFN12Q8IYM2 578 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 LENG9Q96B70 501 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 RIT2Q99578 217 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 TSEN34Q9BSV6 310 aaKnown RBP22.16■■□□□ 1.14
CIRBP-220ENST00000588917 MCM3APO60318 1980 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 TRIOBPQ9H2D6 2365 aa22.16■■□□□ 1.14
CIRBP-220ENST00000588917 SYNRGQ9UMZ2 1314 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 A6NJR5 290 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 ADAMTS4O75173 837 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 PGK1P00558 417 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 ZSCAN22P10073 491 aaPredicted RBP22.15■■□□□ 1.14
CIRBP-220ENST00000588917 CST5P28325 142 aaPredicted RBP22.15■■□□□ 1.14
CIRBP-220ENST00000588917 ARHGAP1Q07960 439 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 FSCN1Q16658 493 aaKnown RBP22.15■■□□□ 1.14
CIRBP-220ENST00000588917 TMEM63BQ5T3F8 832 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 CYFIP1Q7L576 1253 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 FERMT3Q86UX7 667 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 KLHDC9Q8NEP7 349 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 COPS5Q92905 334 aa22.15■■□□□ 1.14
CIRBP-220ENST00000588917 LRRC37A2A6NM11 1700 aa22.14■■□□□ 1.14
CIRBP-220ENST00000588917 KBTBD13C9JR72 458 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 DNM1LO00429 736 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 NOP56O00567 594 aaKnown RBP22.14■■□□□ 1.13
CIRBP-220ENST00000588917 MSH4O15457 936 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 NEMFO60524 1076 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 PPFIA4O75335 1185 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 LRRC41Q15345 812 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 GJC2Q5T442 439 aaPredicted RBP22.14■■□□□ 1.13
CIRBP-220ENST00000588917 PPTC7Q8NI37 304 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 SLC5A5Q92911 643 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 SPATA33Q96N06 139 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 POLR3EQ9NVU0 708 aa22.14■■□□□ 1.13
CIRBP-220ENST00000588917 MOXD2PA6NHM9 499 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 LAD1O00515 517 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 MYCNP04198 464 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-220ENST00000588917 MCM7P33993 719 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 NUCB2P80303 420 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 DGKDQ16760 1214 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 LENG1Q96BZ8 264 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-220ENST00000588917 JPH1Q9HDC5 661 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-220ENST00000588917 KCNMB3Q9NPA1 279 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 PKD2L1Q9P0L9 805 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 SLC9A2Q9UBY0 812 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 KIAA1217Q5T5P2 1943 aa22.13■■□□□ 1.13
CIRBP-220ENST00000588917 SLC37A4O43826 429 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 GAS7O60861 476 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 TOB1P50616 345 aaPredicted RBP22.12■■□□□ 1.13
CIRBP-220ENST00000588917 KRT76Q01546 638 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 RESTQ13127 1097 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 ZNF174Q15697 407 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 CALCRLQ16602 461 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 LRCH2Q5VUJ6 765 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 ETNPPLQ8TBG4 499 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 AFG1LQ8WV93 481 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 SEPT1Q8WYJ6 367 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 TEKT3Q9BXF9 490 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 CEP131Q9UPN4 1083 aa22.12■■□□□ 1.13
CIRBP-220ENST00000588917 RANBP2P49792 3224 aaKnown RBP22.11■■□□□ 1.13
CIRBP-220ENST00000588917 DHX15O43143 795 aaKnown RBP22.11■■□□□ 1.13
CIRBP-220ENST00000588917 CABYRO75952 493 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 BMP15O95972 392 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 ITGB3BPQ13352 177 aaPredicted RBP22.11■■□□□ 1.13
CIRBP-220ENST00000588917 KCNA10Q16322 511 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 ZNF746Q6NUN9 644 aaPredicted RBP22.11■■□□□ 1.13
CIRBP-220ENST00000588917 PCDHA12Q9UN75 941 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 ATP6V1DQ9Y5K8 247 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 MYH7BA7E2Y1 1941 aa22.11■■□□□ 1.13
CIRBP-220ENST00000588917 EVI5O60447 810 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 PSMD10O75832 226 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 BRD1O95696 1058 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 F13A1P00488 732 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 HSDL1Q3SXM5 330 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 CCSAPQ6IQ19 270 aaPredicted RBP22.1■■□□□ 1.13
CIRBP-220ENST00000588917 POTEDQ86YR6 584 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 SMAP1Q8IYB5 467 aaPredicted RBP22.1■■□□□ 1.13
CIRBP-220ENST00000588917 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.1■■□□□ 1.13
CIRBP-220ENST00000588917 PCDHB6Q9Y5E3 794 aa22.1■■□□□ 1.13
CIRBP-220ENST00000588917 CTAGE5O15320 804 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 ASGR1P07306 291 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 MMP3P08254 477 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 SFNP31947 248 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 ACLYP53396 1101 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 BEX3Q00994 111 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 ATL3Q6DD88 541 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 GLT1D1Q96MS3 346 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 ZNF396Q96N95 335 aaPredicted RBP22.09■■□□□ 1.13
CIRBP-220ENST00000588917 MTMR9Q96QG7 549 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 GPR20Q99678 358 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 SEZ6LQ9BYH1 1024 aa22.09■■□□□ 1.13
CIRBP-220ENST00000588917 BCAS3Q9H6U6 928 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms