RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 ZIM3Q96PE6 472 aa16.83■□□□□ 0.29
SAFB-205ENST00000588852 DDX4Q9NQI0 724 aaKnown RBP16.83■□□□□ 0.29
SAFB-205ENST00000588852 STK17AQ9UEE5 414 aa16.83■□□□□ 0.29
SAFB-205ENST00000588852 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.29
SAFB-205ENST00000588852 RIMBP2O15034 1052 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 TCP1P17987 556 aaKnown RBP16.83■□□□□ 0.28
SAFB-205ENST00000588852 CASP5P51878 434 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 SNAP25P60880 206 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 GNGT1P63211 74 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 LRRC63Q05C16 580 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 NOX5Q96PH1 765 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 RFC4P35249 363 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 PAFAH1B1P43034 410 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 BCAS4Q8TDM0 211 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 KRT12Q99456 494 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 POLLQ9UGP5 575 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
SAFB-205ENST00000588852 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 SLC20A2Q08357 652 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 PDCLQ13371 301 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 FAM26FQ5R3K3 315 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 MEIS1O00470 390 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
SAFB-205ENST00000588852 GTF2IP78347 998 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
SAFB-205ENST00000588852 TMEM119Q4V9L6 283 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 HERC4Q5GLZ8 1057 aaPredicted RBP16.82■□□□□ 0.28
SAFB-205ENST00000588852 SFMBT2Q5VUG0 894 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
SAFB-205ENST00000588852 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 IKZF4Q9H2S9 585 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
SAFB-205ENST00000588852 PRLRP16471 622 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 SLC9C1Q4G0N8 1177 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 KLHL7Q8IXQ5 586 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
SAFB-205ENST00000588852 TSG101Q99816 390 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
SAFB-205ENST00000588852 PJA2O43164 708 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 PPP1R2P41236 205 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 CORO7P57737 925 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 PSMC6P62333 389 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 SEMA3FQ13275 785 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 SCFD1Q8WVM8 642 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 TSPYL1Q9H0U9 437 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
SAFB-205ENST00000588852 ZEB2O60315 1214 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 SHOX2O60902 331 aaPredicted RBP16.8■□□□□ 0.28
SAFB-205ENST00000588852 SLC9A1P19634 815 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 SCNN1DP51172 638 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 PDIA5Q14554 519 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 ZNF572Q7Z3I7 529 aaPredicted RBP16.8■□□□□ 0.28
SAFB-205ENST00000588852 DAGLAQ9Y4D2 1042 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.8■□□□□ 0.28
SAFB-205ENST00000588852 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 EPHB4P54760 987 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 POTEGQ6S5H5 508 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
SAFB-205ENST00000588852 UTRNP46939 3433 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 ESYT2A0FGR8 921 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 MAGEA9P43362 315 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 LIG3P49916 1009 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
SAFB-205ENST00000588852 SH3GL2Q99962 352 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 CEP72Q9P209 647 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 ADAM9Q13443 819 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 DDX42Q86XP3 938 aaKnown RBP eCLIP16.79■□□□□ 0.28
SAFB-205ENST00000588852 CASKIN2Q8WXE0 1202 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 P2RX7Q99572 595 aaKnown RBP16.79■□□□□ 0.28
SAFB-205ENST00000588852 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 PCDHA2Q9Y5H9 948 aa16.79■□□□□ 0.28
SAFB-205ENST00000588852 MED24O75448 989 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
SAFB-205ENST00000588852 PLA2G4BP0C869 781 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 KLHL30Q0D2K2 578 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 ARSHQ5FYA8 562 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 RIC8AQ9NPQ8 531 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
SAFB-205ENST00000588852 GRID2IPA4D2P6 1211 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms