RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 MCM6Q14566 821 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 KCNB1Q14721 858 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 SHCBP1Q8NEM2 672 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
SMAD4-205ENST00000588745 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
SMAD4-205ENST00000588745 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
SMAD4-205ENST00000588745 LRRC27Q9C0I9 530 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 PASKQ96RG2 1323 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-205ENST00000588745 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 ASTN1O14525 1302 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 IKBKBO14920 756 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 STAM2O75886 525 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-205ENST00000588745 ASIC1P78348 528 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 ITGB3BPQ13352 177 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-205ENST00000588745 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
SMAD4-205ENST00000588745 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 RASAL3Q86YV0 1011 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 PDLIM2Q96JY6 352 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 PPP1R9BQ96SB3 815 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 IWS1Q96ST2 819 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
SMAD4-205ENST00000588745 MROH8Q9H579 483 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
SMAD4-205ENST00000588745 E9PMD0 336 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 DDX39AO00148 427 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 DHX15O43143 795 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 MUTP22033 750 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 MYL5Q02045 173 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 NCAPHQ15003 741 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 EPHA7Q15375 998 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 Q3C1V9 767 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 FAM133AQ8N9E0 248 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 NEK9Q8TD19 979 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 CCDC47Q96A33 483 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 HSD17B14Q9BPX1 270 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
SMAD4-205ENST00000588745 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
SMAD4-205ENST00000588745 KIAA1217Q5T5P2 1943 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 MYMKA6NI61 221 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 MAFGO15525 162 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 AP5Z1O43299 807 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 RGS20O76081 388 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 PLA2G4BP0C869 781 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 ERCC5P28715 1186 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-205ENST00000588745 TPM4P67936 248 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 CCNA1P78396 465 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 KCTD2Q14681 263 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 MIER3Q7Z3K6 550 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 MMP19Q99542 508 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-205ENST00000588745 EXOC1Q9NV70 894 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 MORF4L1Q9UBU8 362 aa12.75□□□□□ -0.37
SMAD4-205ENST00000588745 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 PPP1R3GB7ZBB8 358 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 SLITRK3O94933 977 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 ADCY5O95622 1261 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 SSBP05455 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 EDNRBP24530 442 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 KRT76Q01546 638 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 PDE4DQ08499 809 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
SMAD4-205ENST00000588745 STXBP2Q15833 593 aa12.74□□□□□ -0.37
SMAD4-205ENST00000588745 RGMBQ6NW40 437 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms