RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ZMYM1Q5SVZ6 1142 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 ARHGEF16Q5VV41 709 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
GGA3-219ENST00000584550 FBXL6Q8N531 539 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 PPTC7Q8NI37 304 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
GGA3-219ENST00000584550 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 PRRX2Q99811 253 aa11.91□□□□□ -0.5
GGA3-219ENST00000584550 ALG13Q9NP73 1137 aaKnown RBP11.91□□□□□ -0.5
GGA3-219ENST00000584550 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 H0Y858 1186 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 TREHO43280 583 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 EIF3JO75822 258 aaKnown RBP11.9□□□□□ -0.5
GGA3-219ENST00000584550 BMPR1AP36894 532 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 ZNF543Q08ER8 600 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
GGA3-219ENST00000584550 ADAM15Q13444 863 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 PKN1Q16512 942 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 RGS22Q8NE09 1264 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
GGA3-219ENST00000584550 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
GGA3-219ENST00000584550 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
GGA3-219ENST00000584550 TLR9Q9NR96 1032 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 PNMA2Q9UL42 364 aa11.9□□□□□ -0.5
GGA3-219ENST00000584550 C5orf67F2Z3F1 127 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 ORC4O43929 436 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 PPFIA4O75335 1185 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 RB1P06400 928 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 MYCLP12524 364 aaPredicted RBP11.89□□□□□ -0.51
GGA3-219ENST00000584550 SDSP20132 328 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 FOXK2Q01167 660 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 IWS1Q96ST2 819 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 C16orf70Q9BSU1 422 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 LMAN2LQ9H0V9 348 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 CLEC1BQ9P126 229 aa11.89□□□□□ -0.51
GGA3-219ENST00000584550 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 ZDBF2Q9HCK1 2354 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 LOC730098B7Z3J9 87 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 GGPS1O95749 300 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 NR3C2P08235 984 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 GSPT1P15170 499 aaKnown RBP11.88□□□□□ -0.51
GGA3-219ENST00000584550 AVPR2P30518 371 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 SP2Q02086 613 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 CAMK1Q14012 370 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 CDC37Q16543 378 aaPredicted RBP11.88□□□□□ -0.51
GGA3-219ENST00000584550 ADGRD2Q7Z7M1 963 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 RBM23Q86U06 439 aaKnown RBP11.88□□□□□ -0.51
GGA3-219ENST00000584550 MSLNLQ96KJ4 702 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 RNPEPQ9H4A4 650 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 VAT1LQ9HCJ6 419 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 PXMP2Q9NR77 195 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 HELLSQ9NRZ9 838 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 ANAPC4Q9UJX5 808 aa11.88□□□□□ -0.51
GGA3-219ENST00000584550 ABCB11O95342 1321 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 DCHS1Q96JQ0 3298 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 VPS13AQ96RL7 3174 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 H3BRB1 525 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 EYA4O95677 639 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 CFBP00751 764 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 DNAJB1P25685 340 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 BTG3Q14201 252 aaPredicted RBP11.87□□□□□ -0.51
GGA3-219ENST00000584550 MCMDC2Q4G0Z9 681 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 CELF3Q5SZQ8 465 aaKnown RBP11.87□□□□□ -0.51
GGA3-219ENST00000584550 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
GGA3-219ENST00000584550 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
GGA3-219ENST00000584550 TUT1Q9H6E5 874 aaKnown RBP11.87□□□□□ -0.51
GGA3-219ENST00000584550 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 BARX2Q9UMQ3 279 aaPredicted RBP11.87□□□□□ -0.51
GGA3-219ENST00000584550 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
GGA3-219ENST00000584550 ADGRA3Q8IWK6 1321 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 KDM4AO75164 1064 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 RGS20O76081 388 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 PDGFBP01127 241 aaPredicted RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 MMP1P03956 469 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 FGRP09769 529 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 HOXD8P13378 290 aaPredicted RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 NRIP1P48552 1158 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 HAND2P61296 217 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms