RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 BFSP2Q13515 415 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 NTRK3Q16288 839 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 PKN1Q16512 942 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 Q7L0L9 218 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 RPUSD2Q8IZ73 545 aaKnown RBP23.36■■□□□ 1.33
SS18-224ENST00000584083 ZNF274Q96GC6 653 aaPredicted RBP23.36■■□□□ 1.33
SS18-224ENST00000584083 C16orf70Q9BSU1 422 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 RNF26Q9BY78 433 aaPredicted RBP23.36■■□□□ 1.33
SS18-224ENST00000584083 JADE2Q9NQC1 790 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 PKD2L1Q9P0L9 805 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 GTF2IRD1Q9UHL9 959 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 SCN5AQ14524 2016 aa23.36■■□□□ 1.33
SS18-224ENST00000584083 H3BRB1 525 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 ATP9AO75110 1047 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 FGBP02675 491 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 LGALS2P05162 132 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 AP3B2Q13367 1082 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 JAKMIP3Q5VZ66 844 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 GPR20Q99678 358 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 TUT1Q9H6E5 874 aaKnown RBP23.35■■□□□ 1.33
SS18-224ENST00000584083 C6orf50Q9HD87 102 aa23.35■■□□□ 1.33
SS18-224ENST00000584083 LAMA2P24043 3122 aaKnown RBP23.34■■□□□ 1.33
SS18-224ENST00000584083 CPLX1O14810 134 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 KCNA2P16389 499 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 ANAPC15P60006 121 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 SMAD3P84022 425 aaKnown RBP23.34■■□□□ 1.33
SS18-224ENST00000584083 STK3Q13188 491 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 UTP14CQ5TAP6 766 aaKnown RBP23.34■■□□□ 1.33
SS18-224ENST00000584083 TRIM22Q8IYM9 498 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 CCDC155Q8N6L0 562 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 MXRA8Q9BRK3 442 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 ZMYND12Q9H0C1 365 aa23.34■■□□□ 1.33
SS18-224ENST00000584083 ESYT2A0FGR8 921 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 PITPNM1O00562 1244 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 MAFGO15525 162 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 ZNF76P36508 570 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 CLK2P49760 499 aaKnown RBP23.33■■□□□ 1.33
SS18-224ENST00000584083 SSRP1Q08945 709 aaKnown RBP23.33■■□□□ 1.33
SS18-224ENST00000584083 DEFB128Q7Z7B8 93 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 MTIF3Q9H2K0 278 aaKnown RBP23.33■■□□□ 1.33
SS18-224ENST00000584083 TELO2Q9Y4R8 837 aa23.33■■□□□ 1.33
SS18-224ENST00000584083 KAT6AQ92794 2004 aa23.33■■□□□ 1.32
SS18-224ENST00000584083 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.32■■□□□ 1.32
SS18-224ENST00000584083 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.32■■□□□ 1.32
SS18-224ENST00000584083 IQCF3P0C7M6 154 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 GNA11P29992 359 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 SREBF1P36956 1147 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 CPLX2Q6PUV4 134 aaKnown RBP23.32■■□□□ 1.32
SS18-224ENST00000584083 OTOP2Q7RTS6 562 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 REXO1Q8N1G1 1221 aaKnown RBP23.32■■□□□ 1.32
SS18-224ENST00000584083 CAGE1Q8TC20 777 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 HERVK_113Q902F9 699 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 CTAGE1Q96RT6 745 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 TANC1Q9C0D5 1861 aa23.32■■□□□ 1.32
SS18-224ENST00000584083 RFC2P35250 354 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 ARHGAP4P98171 946 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 ZNF200P98182 395 aaPredicted RBP23.31■■□□□ 1.32
SS18-224ENST00000584083 CEP55Q53EZ4 464 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 ZNF697Q5TEC3 545 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 MCTP2Q6DN12 878 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 FAM109BQ6ICB4 259 aaPredicted RBP23.31■■□□□ 1.32
SS18-224ENST00000584083 TRIM50Q86XT4 487 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 CCDC148Q8NFR7 591 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 CYP2W1Q8TAV3 490 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 KCNH7Q9NS40 1196 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 VPS54Q9P1Q0 977 aa23.31■■□□□ 1.32
SS18-224ENST00000584083 ZNF215Q9UL58 517 aaPredicted RBP23.31■■□□□ 1.32
SS18-224ENST00000584083 PFKMP08237 780 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 TCF7P36402 384 aaPredicted RBP23.3■■□□□ 1.32
SS18-224ENST00000584083 PTK7Q13308 1070 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 RASIP1Q5U651 963 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 BICD2Q8TD16 824 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 AFAP1L1Q8TED9 768 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 SEPT1Q8WYJ6 367 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 DHX38Q92620 1227 aaKnown RBP23.3■■□□□ 1.32
SS18-224ENST00000584083 FAM161BQ96MY7 647 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 MTMR10Q9NXD2 777 aa23.3■■□□□ 1.32
SS18-224ENST00000584083 C17orf102A2RUQ5 167 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 ADAMTS3O15072 1205 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 SMIM10L2AP0DMW4 78 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 SMIM10L2BP0DMW5 78 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 ARP10275 920 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 SDF4Q9BRK5 362 aa23.29■■□□□ 1.32
SS18-224ENST00000584083 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
SS18-224ENST00000584083 CXXC1Q9P0U4 656 aaPredicted RBP23.29■■□□□ 1.32
SS18-224ENST00000584083 GSTTP1A0A1W2PQM5 241 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 NLRP5P59047 1200 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 HIC1Q14526 733 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 LRRC8DQ7L1W4 858 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 ATP6V0A1Q93050 837 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 VWCEQ96DN2 955 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 SLKQ9H2G2 1235 aaPredicted RBP23.28■■□□□ 1.32
SS18-224ENST00000584083 JPH1Q9HDC5 661 aaPredicted RBP23.28■■□□□ 1.32
SS18-224ENST00000584083 SH3GLB2Q9NR46 395 aa23.28■■□□□ 1.32
SS18-224ENST00000584083 ZBBXA8MT70 800 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 GRXCR1A8MXD5 290 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 MEIS1O00470 390 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 DEXIO95424 95 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 SEC24BO95487 1268 aa23.27■■□□□ 1.32
SS18-224ENST00000584083 CKBP12277 381 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms