RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 RNF208Q9H0X6 261 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 TDRD3Q9H7E2 651 aaKnown RBP8.27□□□□□ -1.09
TVP23C-208ENST00000581273 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
TVP23C-208ENST00000581273 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
TVP23C-208ENST00000581273 SWAP70Q9UH65 585 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 MAN1B1Q9UKM7 699 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 ZMYM6O95789 1325 aa8.27□□□□□ -1.09
TVP23C-208ENST00000581273 USO1O60763 962 aaKnown RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CSF1RP07333 972 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 GSTA1P08263 222 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CYP21A2P08686 494 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 HOXB1P14653 301 aaPredicted RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 SCP2P22307 547 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 PBX1P40424 430 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 SARSP49591 514 aaKnown RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 RBL2Q08999 1139 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 PAK2Q13177 524 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 BIRC2Q13490 618 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 NAA25Q14CX7 972 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 LACTB2Q53H82 288 aaPredicted RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CFAP58Q5T655 872 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 RUFY4Q6ZNE9 571 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 SND1Q7KZF4 910 aaKnown RBP eCLIP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CCDC170Q8IYT3 715 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 MREGQ8N565 214 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 LINS1Q8NG48 757 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 NOC3LQ8WTT2 800 aaKnown RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 ITFG2Q969R8 447 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 NECAB3Q96P71 396 aaPredicted RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 HAUS7Q99871 368 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 TMEM39BQ9GZU3 492 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 BOLA2Q9H3K6 86 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 SLC40A1Q9NP59 571 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CNNM1Q9NRU3 951 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 INTS13Q9NVM9 706 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 ETAA1Q9NY74 926 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 CSADQ9Y600 493 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 EPN1Q9Y6I3 576 aaPredicted RBP8.26□□□□□ -1.09
TVP23C-208ENST00000581273 MYH15Q9Y2K3 1946 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 GRIN2DO15399 1336 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 SYNRGQ9UMZ2 1314 aa8.26□□□□□ -1.09
TVP23C-208ENST00000581273 UNCXA6NJT0 531 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 TTC36A6NLP5 189 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 ABLIM1O14639 778 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 TACC1O75410 805 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 DNAJC8O75937 253 aaPredicted RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 IL1R1P14778 569 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 LSP1P33241 339 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 GCKP35557 465 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 GYG1P46976 350 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 GTF2A2P52657 109 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CACNB3P54284 484 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CASP7P55210 303 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 BIRC3Q13489 604 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 PNOCQ13519 176 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 RIPK1Q13546 671 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 TNFAIP1Q13829 316 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 VGLL4Q14135 290 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 KIF22Q14807 665 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 SEPT2Q15019 361 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 RILPL1Q5EBL4 403 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 SPECC1Q5M775 1068 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 MFSD14BQ5SR56 506 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 NAA35Q5VZE5 725 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CYB5D1Q6P9G0 228 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 LRIG3Q6UXM1 1119 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 LDHAL6AQ6ZMR3 332 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CCDC129Q6ZRS4 1044 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 RALYLQ86SE5 291 aaKnown RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CROCCP2Q86T23 111 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CEP57Q86XR8 500 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 HOMEZQ8IX15 550 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 DHX37Q8IY37 1157 aaKnown RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CCDC13Q8IYE1 715 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 KBTBD3Q8NAB2 608 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 TRIM58Q8NG06 486 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 OR8K1Q8NGG5 319 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 WHAMMQ8TF30 809 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 ZNF473Q8WTR7 871 aaKnown RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 EAF2Q96CJ1 260 aaPredicted RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CLIC6Q96NY7 704 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 ALS2CR12Q96Q35 445 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 GSDMAQ96QA5 445 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 NUP88Q99567 741 aaPredicted RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 FTOQ9C0B1 505 aaKnown RBP eCLIP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 NUCKS1Q9H1E3 243 aaKnown RBP8.25□□□□□ -1.09
TVP23C-208ENST00000581273 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 CENPHQ9H3R5 247 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 EPHX3Q9H6B9 360 aa8.25□□□□□ -1.09
TVP23C-208ENST00000581273 SUGCTQ9HAC7 445 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms