RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 URODP06132 367 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CYP2C9P11712 490 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SFNP31947 248 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ALDH1A3P47895 512 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 UBXN1Q04323 297 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PRKCQQ04759 706 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 KYAT1Q16773 422 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 HHIPL2Q6UWX4 724 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CEP68Q76N32 757 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 RUFY3Q7L099 469 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PROM2Q8N271 834 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 AFG1LQ8WV93 481 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 NAP1L3Q99457 506 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP1R12CQ9BZL4 782 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 STN1Q9H668 368 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TMEM206Q9H813 350 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 METTL14Q9HCE5 456 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CTTNBP2NLQ9P2B4 639 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 AXIN2Q9Y2T1 843 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 LUC7L2Q9Y383 392 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MROH7-TTC4A0A0A0MT08 1334 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 AOX1Q06278 1338 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MYPNQ86TC9 1320 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 F5H6K3 240 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 RGL2O15211 777 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TECP42680 631 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 STX17P56962 302 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 UBASH3AP57075 661 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PTK2Q05397 1052 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 KLRC3Q07444 240 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 AP3B2Q13367 1082 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CLUL1Q15846 466 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 AAK1Q2M2I8 961 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 C6orf163Q5TEZ5 329 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 DEFB128Q7Z7B8 93 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CSGALNACT2Q8N6G5 542 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 LINC00116Q8NCU8 138 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 UBXN4Q92575 508 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CEP63Q96MT8 703 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 LLPHQ9BRT6 129 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SENP6Q9GZR1 1112 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 NXF1Q9UBU9 619 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MTRF1LQ9UGC7 380 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SERPINA10Q9UK55 444 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MAGED2Q9UNF1 606 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ITM2BQ9Y287 266 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 FAN1Q9Y2M0 1017 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SH3BP1Q9Y3L3 701 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PXDNLA1KZ92 1463 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ARHGAP31Q2M1Z3 1444 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 RPAP1Q9BWH6 1393 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CDHR2Q9BYE9 1310 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 FAM196BA6NMK8 535 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SGSM2O43147 1006 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 KRT86O43790 486 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 XRCC5P13010 732 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CA4P22748 312 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CASQ1P31415 396 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF165P49910 485 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 STAT5BP51692 787 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PRMT2P55345 433 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 HDLBPQ00341 1268 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CXCL9Q07325 125 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 LAMC2Q13753 1193 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 BTG3Q14201 252 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SNX17Q15036 470 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ARHGAP44Q17R89 818 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 BEND3Q5T5X7 828 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 LGSNQ5TDP6 509 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP1R2P3Q6NXS1 205 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TMC6Q7Z403 805 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 UBL4BQ8N7F7 174 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 STKLD1Q8NE28 680 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SEPT1Q8WYJ6 367 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 OPTNQ96CV9 577 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF560Q96MR9 790 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 NT5C1BQ96P26 610 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PIGSQ96S52 555 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MTRQ99707 1265 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TRIM62Q9BVG3 475 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 UBE2OQ9C0C9 1292 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 IGFLR1Q9H665 355 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TRPC7Q9HCX4 862 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PIN4Q9Y237 131 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 DIP2CQ9Y2E4 1556 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 UTYO14607 1347 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ABCC4O15439 1325 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 C17orf102A2RUQ5 167 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PDHXO00330 501 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 NCAM2O15394 837 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CLDN3O15551 220 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 STRNO43815 780 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 CABYRO75952 493 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 FARP2O94887 1054 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 GGPS1O95749 300 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 HOXC6P09630 235 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ZSCAN22P10073 491 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 ITGA4P13612 1032 aa3.19□□□□□ -1.9
SMCHD1-203ENST00000577880 PTGS1P23219 599 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms