RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RC3H2Q9HBD1 1191 aaKnown RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 PLAGL2Q9UPG8 496 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 SORCS3Q9UPU3 1222 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 NR2E1Q9Y466 385 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 LCTP09848 1927 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 MYH4Q9Y623 1939 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 RALGAPA2Q2PPJ7 1873 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 DNAH14Q0VDD8 3507 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 RNF113AO15541 343 aaKnown RBP6.9□□□□□ -1.3
SMG6-219ENST00000575663 PPFIA4O75335 1185 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 GLP2RO95838 553 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 LINC00271P0C7V0 271 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.3
SMG6-219ENST00000575663 PUM1Q14671 1186 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMG6-219ENST00000575663 ARHGEF16Q5VV41 709 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 ASTLQ6HA08 431 aaPredicted RBP6.9□□□□□ -1.3
SMG6-219ENST00000575663 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 KCNV1Q6PIU1 500 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 ADGRD2Q7Z7M1 963 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 RBM23Q86U06 439 aaKnown RBP6.9□□□□□ -1.3
SMG6-219ENST00000575663 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 CMTR2Q8IYT2 770 aaKnown RBP6.9□□□□□ -1.3
SMG6-219ENST00000575663 TMEM105Q8N8V8 129 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 KREMEN2Q8NCW0 462 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 KCNG4Q8TDN1 519 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 SUSD6Q92537 303 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 RMDN1Q96DB5 314 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 GPATCH3Q96I76 525 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 TLE6Q9H808 572 aa6.9□□□□□ -1.3
SMG6-219ENST00000575663 PLXNA3P51805 1871 aa6.9□□□□□ -1.31
SMG6-219ENST00000575663 ZFHX2Q9C0A1 2572 aaPredicted RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 H3BRB1 525 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 M0R2C6 588 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 NOP56O00567 594 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 TREHO43280 583 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 RANBP6O60518 1105 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 NMT2O60551 498 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 EIF3JO75822 258 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 KRT37O76014 449 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 GGPS1O95749 300 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 ITGB1P05556 798 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 SMIM10L2AP0DMW4 78 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 SMIM10L2BP0DMW5 78 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 GHRP10912 638 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 PDHBP11177 359 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 TOP1P11387 765 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 SP100P23497 879 aaPredicted RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 HOXC8P31273 242 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 CLCN5P51795 746 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 UBE3AQ05086 875 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 CAMK1Q14012 370 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 HIC1Q14526 733 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 HSDL1Q3SXM5 330 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 GPATCH4Q5T3I0 446 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 ZNF689Q96CS4 500 aaPredicted RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 RMDN3Q96TC7 470 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 SEMA4AQ9H3S1 761 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 MLXIPQ9HAP2 919 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 TSHZ2Q9NRE2 1034 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 IL17RBQ9NRM6 502 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 TOMM22Q9NS69 142 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG6-219ENST00000575663 MRPL42Q9Y6G3 142 aaKnown RBP6.89□□□□□ -1.31
SMG6-219ENST00000575663 ABCB11O95342 1321 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 MICAL3Q7RTP6 2002 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 TRIOO75962 3097 aa6.89□□□□□ -1.31
SMG6-219ENST00000575663 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 DGKIO75912 1065 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 RGS20O76081 388 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 LMNAP02545 664 aaKnown RBP6.88□□□□□ -1.31
SMG6-219ENST00000575663 LGALS2P05162 132 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 STAG3L1P0CL83 205 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 RLBP1P12271 317 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 DNAJB1P25685 340 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 NOVP48745 357 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 FAM26DQ5JW98 314 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 CELF3Q5SZQ8 465 aaKnown RBP6.88□□□□□ -1.31
SMG6-219ENST00000575663 MYSM1Q5VVJ2 828 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 PDE12Q6L8Q7 609 aaKnown RBP6.88□□□□□ -1.31
SMG6-219ENST00000575663 RSPH3Q86UC2 560 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 NECTIN4Q96NY8 510 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 TAAR1Q96RJ0 339 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 TMEM47Q9BQJ4 181 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 C16orf70Q9BSU1 422 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms