RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 LGALS2P05162 132 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 GNAT1P11488 350 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 HOXC8P31273 242 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
PRPF8-206ENST00000572723 TAP1Q03518 808 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 HIC1Q14526 733 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 RNF20Q5VTR2 975 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
PRPF8-206ENST00000572723 ATP6V0A1Q93050 837 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 GPR20Q99678 358 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
PRPF8-206ENST00000572723 RNPEPQ9H4A4 650 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 PRDM6Q9NQX0 595 aa13.49□□□□□ -0.25
PRPF8-206ENST00000572723 VCANP13611 3396 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 EMSYQ7Z589 1322 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 GTPBP6O43824 516 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-206ENST00000572723 PLEKHA8P1O95397 391 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
PRPF8-206ENST00000572723 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-206ENST00000572723 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
PRPF8-206ENST00000572723 WNT8BQ93098 351 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 ASB2Q96Q27 587 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 RAD9AQ99638 391 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 THEGQ9P2T0 379 aa13.48□□□□□ -0.25
PRPF8-206ENST00000572723 DOCK5Q9H7D0 1870 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 MAFGO15525 162 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 CAND2O75155 1236 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 LGR5O75473 907 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 SMIM10L2BP0DMW5 78 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 RXRAP19793 462 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 THPOP40225 353 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 COL9A3Q14050 684 aaPredicted RBP13.47□□□□□ -0.25
PRPF8-206ENST00000572723 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 GPRASP2Q96D09 838 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 CERS4Q9HA82 394 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
PRPF8-206ENST00000572723 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
PRPF8-206ENST00000572723 TRANK1O15050 2925 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 RFXAPO00287 272 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 TREHO43280 583 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 GJB5O95377 273 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 DEFB103AP81534 67 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
PRPF8-206ENST00000572723 MBTPS1Q14703 1052 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 TCTN1Q2MV58 587 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.25
PRPF8-206ENST00000572723 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 DBF4BQ8NFT6 615 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 SETD4Q9NVD3 440 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
PRPF8-206ENST00000572723 PTPRSQ13332 1948 aa13.46□□□□□ -0.25
PRPF8-206ENST00000572723 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 ATP9AO75110 1047 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 ADAM17P78536 824 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 SEPT1Q8WYJ6 367 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 LMCD1Q9NZU5 365 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 PCDHA6Q9UN73 950 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 PCDHA8Q9Y5H6 950 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 UBIAD1Q9Y5Z9 338 aa13.45□□□□□ -0.26
PRPF8-206ENST00000572723 NRCAMQ92823 1304 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 EPOPA6NHQ4 379 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 KCNA2P16389 499 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 ITGB5P18084 799 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 KRT32Q14532 448 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 AAK1Q2M2I8 961 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 FAM26DQ5JW98 314 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
PRPF8-206ENST00000572723 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 TMCO2Q7Z6W1 182 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-206ENST00000572723 MICU3Q86XE3 530 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 RAB11FIP4Q86YS3 637 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 SEPT8Q92599 483 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 JADE2Q9NQC1 790 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 INSL6Q9Y581 213 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
PRPF8-206ENST00000572723 TCF20Q9UGU0 1960 aaKnown RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 LCHNA4D1U4 455 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms