RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 CYTH3O43739 400 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 EFCAB14O75071 495 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 PSMA5P28066 241 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 CCND2P30279 289 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 MCM5P33992 734 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 TRAF1Q13077 416 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 IKBKEQ14164 716 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 FCHSD1Q86WN1 690 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 KCNB2Q92953 911 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 RAD9AQ99638 391 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
NPLOC4-207ENST00000572346 SERINC5Q86VE9 423 aa17.07■□□□□ 0.32
NPLOC4-207ENST00000572346 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-207ENST00000572346 GDPD5Q8WTR4 605 aa17.07■□□□□ 0.32
NPLOC4-207ENST00000572346 MLXIPQ9HAP2 919 aa17.07■□□□□ 0.32
NPLOC4-207ENST00000572346 MICAL3Q7RTP6 2002 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 SIP14410 1827 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 PNMA6FA0A0J9YX94 578 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 PRC1O43663 620 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 LGR5O75473 907 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 TROAPQ12815 778 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 ADCK5Q3MIX3 580 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 HLA-CQ95604 372 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 SUGCTQ9HAC7 445 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 LMCD1Q9NZU5 365 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 MTUS1Q9ULD2 1270 aa17.06■□□□□ 0.32
NPLOC4-207ENST00000572346 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 H3BRB1 525 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 LGALS2P05162 132 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 HOXC8P31273 242 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 THPOP40225 353 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 ERVK-21P61565 698 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 FGD1P98174 961 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 WTAPQ15007 396 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 FAM117BQ6P1L5 589 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 DBF4BQ8NFT6 615 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 ATP6V0A1Q93050 837 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 BACH2Q9BYV9 841 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 TUT1Q9H6E5 874 aaKnown RBP17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 RAPGEFL1Q9UHV5 662 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 BRWD1Q9NSI6 2320 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
NPLOC4-207ENST00000572346 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 ANAPC15P60006 121 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 TMEM87BQ96K49 555 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 INPP4AQ96PE3 977 aaPredicted RBP17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 RNPEPQ9H4A4 650 aa17.04■□□□□ 0.32
NPLOC4-207ENST00000572346 NOP56O00567 594 aaKnown RBP17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 TREHO43280 583 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 STAM2O75886 525 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 SMIM10L2AP0DMW4 78 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 SMIM10L2BP0DMW5 78 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 ICAM3P32942 547 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 ANTXR2P58335 489 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 SEMA3FQ13275 785 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 GNPTABQ3T906 1256 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 INSL6Q9Y581 213 aa17.03■□□□□ 0.32
NPLOC4-207ENST00000572346 SPATA31C2B4DYI2 1134 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 AMHP03971 560 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 NEDD9Q14511 834 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 PLEKHG4Q58EX7 1191 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 TCEANC2Q96MN5 208 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
NPLOC4-207ENST00000572346 FIBPO43427 364 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 CPA1P15085 419 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 GPR20Q99678 358 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 C1QTNF1Q9BXJ1 281 aa17.01■□□□□ 0.31
NPLOC4-207ENST00000572346 OSBPL7Q9BZF2 842 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms