RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 HDGFL2Q7Z4V5 671 aaPredicted RBP6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 PANK1Q8TE04 598 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 CHTF18Q8WVB6 975 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 JPH3Q8WXH2 748 aaPredicted RBP6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 HEXIM2Q96MH2 286 aaKnown RBP6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 RHOBTB2Q9BYZ6 727 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 TRIT1Q9H3H1 467 aaKnown RBP6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 GPATCH2Q9NW75 528 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 GOLGA6AQ9NYA3 693 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
CCNDBP1-207ENST00000565958 NPHP3-ACAD11A0A0J9YXS1 232 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 FAM155AB1AL88 458 aaPredicted RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 GSTA4O15217 222 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 EIF3JO75822 258 aaKnown RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 SOD2P04179 222 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 KRT1P04264 644 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 MYL1P05976 194 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 GSTM1P09488 218 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 SRFP11831 508 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ATP2A2P16615 1042 aaKnown RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ZSCAN20P17040 1043 aaPredicted RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 GRK2P25098 689 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 GRK3P35626 688 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 DNM2P50570 870 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ERVK-21P61565 698 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ST5P78524 1137 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ZP2Q05996 745 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 OVCH1Q7RTY7 1134 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 MAGEB6Q8N7X4 407 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 RCBTB1Q8NDN9 531 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 FBXW5Q969U6 566 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 MMP19Q99542 508 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 ARNT2Q9HBZ2 717 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 SPTLC3Q9NUV7 552 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 LUC7L2Q9Y383 392 aaKnown RBP6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
CCNDBP1-207ENST00000565958 PTPDC1A2A3K4 754 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 FAM47E-STBD1D6RA91 191 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 MYO1BO43795 1136 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 SYPP08247 313 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 CT47B1P0C2W7 299 aaPredicted RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 MYBL2P10244 700 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 IARSP41252 1262 aaKnown RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 PCBP3P57721 371 aaKnown RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 SESN3P58005 492 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 KLF1Q13351 362 aaPredicted RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 IKZF1Q13422 519 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 HDAC1Q13547 482 aaPredicted RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 GFOD2Q3B7J2 385 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 RTP2Q5QGT7 225 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 CXorf57Q6NSI4 855 aaKnown RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 FBXO15Q8NCQ5 510 aaPredicted RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 SLC13A1Q9BZW2 595 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 DUSP15Q9H1R2 295 aaPredicted RBP6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 IP6K2Q9UHH9 426 aa6.62□□□□□ -1.35
CCNDBP1-207ENST00000565958 WASHC2AQ641Q2 1341 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 SSU72P8A0A1W2PR75 194 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 SNUPNO95149 360 aaKnown RBP6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 MT-CO1P00395 513 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 ENDOUP21128 410 aaKnown RBP6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 INF2Q27J81 1249 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 INAVAQ3KP66 663 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 MBLAC2Q68D91 279 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 C16orf59Q7L2K0 433 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 TSPYL5Q86VY4 417 aaPredicted RBP6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 SMC5Q8IY18 1101 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 C2orf69Q8N8R5 385 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 SLC5A5Q92911 643 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 KIRREL1Q96J84 757 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 PTCHD1Q96NR3 888 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 VTA1Q9NP79 307 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 OXSMQ9NWU1 459 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 TCFL5Q9UL49 500 aa6.61□□□□□ -1.35
CCNDBP1-207ENST00000565958 FGF10O15520 208 aaPredicted RBP6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 PRPF3O43395 683 aaKnown RBP6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 TMEM253P0C7T8 217 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 U2AF1L5P0DN76 240 aaPredicted RBP6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 CCND1P24385 295 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 U2AF1Q01081 240 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 DDB1Q16531 1140 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 ARHGAP44Q17R89 818 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 CREB3L3Q68CJ9 461 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 PPP4R4Q6NUP7 873 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 CDADC1Q9BWV3 514 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 FOXP3Q9BZS1 431 aa6.6□□□□□ -1.35
CCNDBP1-207ENST00000565958 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms