RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 TRPV6Q9H1D0 765 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 TRMT13Q9NUP7 481 aaKnown RBP7.94□□□□□ -1.14
SPG11-224ENST00000561268 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
SPG11-224ENST00000561268 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 GCOM1H8Y6P7 765 aaPredicted RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 DHX16O60231 1041 aaKnown RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 POLR2MP0CAP2 368 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 CCND2P30279 289 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 HOXA13P31271 388 aaPredicted RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 RFC2P35250 354 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 GNAQP50148 359 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 LY6KQ17RY6 165 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 TRIM71Q2Q1W2 868 aaKnown RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 CELF3Q5SZQ8 465 aaKnown RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 ARHGEF16Q5VV41 709 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 PCNX4Q63HM2 1172 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 XRRA1Q6P2D8 792 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 TRAF7Q6Q0C0 670 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 ZNF365Q70YC5 407 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 SRBD1Q8N5C6 995 aaKnown RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 CAGE1Q8TC20 777 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 KATNAL1Q9BW62 490 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 VAT1LQ9HCJ6 419 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 ANO2Q9NQ90 1003 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 CXXC1Q9P0U4 656 aaPredicted RBP7.93□□□□□ -1.14
SPG11-224ENST00000561268 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 REV3LO60673 3130 aa7.93□□□□□ -1.14
SPG11-224ENST00000561268 PLXNA4Q9HCM2 1894 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 hCG_1984214I3L0E3 225 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 CXCL10P02778 98 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 MYL3P08590 195 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 CYP2C9P11712 490 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 MCM4P33991 863 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 SP2Q02086 613 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 GPNMBQ14956 572 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 DGKDQ16760 1214 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 ADCK5Q3MIX3 580 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 HSDL1Q3SXM5 330 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 GDF6Q6KF10 455 aaPredicted RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 PPP1R18Q6NYC8 613 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 SEPT14Q6ZU15 432 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 ZNF713Q8N859 430 aaPredicted RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 AFAP1L1Q8TED9 768 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
SPG11-224ENST00000561268 RRP36Q96EU6 259 aaKnown RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 CDX2Q99626 313 aaPredicted RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 SENP7Q9BQF6 1050 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 C16orf70Q9BSU1 422 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 MTIF3Q9H2K0 278 aaKnown RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 SEMA6BQ9H3T3 888 aa7.92□□□□□ -1.14
SPG11-224ENST00000561268 FAM217BQ9NTX9 383 aaPredicted RBP7.92□□□□□ -1.14
SPG11-224ENST00000561268 CCDC69A6NI79 296 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 FIBPO43427 364 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 PPFIA4O75335 1185 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 BAIAP3O94812 1187 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 PARNO95453 639 aaKnown RBP7.91□□□□□ -1.14
SPG11-224ENST00000561268 GGPS1O95749 300 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 IQCF3P0C7M6 154 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 ZNF286BP0CG31 522 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 ACRP10323 421 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 RXRAP19793 462 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
SPG11-224ENST00000561268 HSPA4P34932 840 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 CLK2P49760 499 aaKnown RBP7.91□□□□□ -1.14
SPG11-224ENST00000561268 PSEN2P49810 448 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 MRE11P49959 708 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 ADAM17P78536 824 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 HIC1Q14526 733 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 KRT32Q14532 448 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 GNPTABQ3T906 1256 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 METTL7BQ6UX53 244 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 DHX32Q7L7V1 743 aaKnown RBP7.91□□□□□ -1.14
SPG11-224ENST00000561268 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 FANCBQ8NB91 859 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 CRYGNQ8WXF5 182 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 VTI1AQ96AJ9 217 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 IL17RAQ96F46 866 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 SCLYQ96I15 445 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 GBP4Q96PP9 640 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 NEK1Q96PY6 1258 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 RBM28Q9NW13 759 aaKnown RBP7.91□□□□□ -1.14
SPG11-224ENST00000561268 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
SPG11-224ENST00000561268 TCF20Q9UGU0 1960 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 EMSYQ7Z589 1322 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 ESYT2A0FGR8 921 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 CAND2O75155 1236 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 LGALS2P05162 132 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
SPG11-224ENST00000561268 KCNA2P16389 499 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 PBX2P40425 430 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 CCL23P55773 120 aa7.9□□□□□ -1.14
SPG11-224ENST00000561268 EVCP57679 992 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms