RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ARHGEF16Q5VV41 709 aa12.22□□□□□ -0.45
PABPN1-203ENST00000553960 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
PABPN1-203ENST00000553960 SMAP1Q8IYB5 467 aaPredicted RBP12.22□□□□□ -0.45
PABPN1-203ENST00000553960 CYP2W1Q8TAV3 490 aa12.22□□□□□ -0.45
PABPN1-203ENST00000553960 PNMA5Q96PV4 448 aa12.22□□□□□ -0.45
PABPN1-203ENST00000553960 PTPN18Q99952 460 aa12.22□□□□□ -0.45
PABPN1-203ENST00000553960 WDR81Q562E7 1941 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 FRMD3A2A2Y4 597 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 TMEM88BA6NKF7 163 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 RGS20O76081 388 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 ATG7O95352 703 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 HOXC6P09630 235 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 FCER1AP12319 257 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 PLCG1P19174 1290 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
PABPN1-203ENST00000553960 JAK3P52333 1124 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 SREBF2Q12772 1141 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 PSMD2Q13200 908 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 MTMR1Q13613 665 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
PABPN1-203ENST00000553960 IQCB1Q15051 598 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 LRCH2Q5VUJ6 765 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 IL31RAQ8NI17 732 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 LARP4BQ92615 738 aaKnown RBP12.21□□□□□ -0.45
PABPN1-203ENST00000553960 RAD54LQ92698 747 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 TRIM9Q9C026 710 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 DACH1Q9UI36 760 aa12.21□□□□□ -0.45
PABPN1-203ENST00000553960 ASTN1O14525 1302 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
PABPN1-203ENST00000553960 POTEMA6NI47 508 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ASB14A6NK59 587 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 DKC1O60832 514 aaKnown RBP eCLIP12.2□□□□□ -0.46
PABPN1-203ENST00000553960 GAS7O60861 476 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ALDH1A1P00352 501 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ARP10275 920 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ZNF165P49910 485 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 KCTD2Q14681 263 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 Q3C1V9 767 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ZNF792Q3KQV3 632 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 SARM1Q6SZW1 724 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 SV2BQ7L1I2 683 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 CKAP2LQ8IYA6 745 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 ANKRD35Q8N283 1001 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 FAM43AQ8N2R8 423 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 SYT2Q8N9I0 419 aaPredicted RBP12.2□□□□□ -0.46
PABPN1-203ENST00000553960 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 DHX58Q96C10 678 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 FGD4Q96M96 766 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 DBR1Q9UK59 544 aaKnown RBP12.2□□□□□ -0.46
PABPN1-203ENST00000553960 PPME1Q9Y570 386 aa12.2□□□□□ -0.46
PABPN1-203ENST00000553960 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 SLC15A5A6NIM6 579 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 KLRC4O43908 158 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 MARCH6O60337 910 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 TLR2O60603 784 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 SLITRK3O94933 977 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 EYA4O95677 639 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 P4HBP07237 508 aaKnown RBP12.19□□□□□ -0.46
PABPN1-203ENST00000553960 KCNA2P16389 499 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
PABPN1-203ENST00000553960 BMP6P22004 513 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
PABPN1-203ENST00000553960 PNOCQ13519 176 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 GRB14Q14449 540 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 C17orf99Q6UX52 265 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 C4orf19Q8IY42 314 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 PDILTQ8N807 584 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
PABPN1-203ENST00000553960 LRRC15Q8TF66 581 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 PDLIM2Q96JY6 352 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 NACC1Q96RE7 527 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
PABPN1-203ENST00000553960 TIPINQ9BVW5 301 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 HOMER2Q9NSB8 354 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 MAN1B1Q9UKM7 699 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 PLXNA1Q9UIW2 1896 aa12.19□□□□□ -0.46
PABPN1-203ENST00000553960 IGKV6D-21A0A0A0MT36 114 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 SCP2P22307 547 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 CDC25AP30304 524 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 CCT6AP40227 531 aaKnown RBP12.18□□□□□ -0.46
PABPN1-203ENST00000553960 SLC12A3P55017 1021 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 NOGQ13253 232 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
PABPN1-203ENST00000553960 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
PABPN1-203ENST00000553960 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
PABPN1-203ENST00000553960 ZNF658Q5TYW1 1059 aaPredicted RBP12.18□□□□□ -0.46
PABPN1-203ENST00000553960 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms