RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CST5P28325 142 aaPredicted RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 ARHGAP1Q07960 439 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 LRRC41Q15345 812 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 GNASQ5JWF2 1037 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 TTC38Q5R3I4 469 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 TMEM63BQ5T3F8 832 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 GJC2Q5T442 439 aaPredicted RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 KLHDC9Q8NEP7 349 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 LENG9Q96B70 501 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 LENG1Q96BZ8 264 aaPredicted RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 FAM20AQ96MK3 541 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 TSEN34Q9BSV6 310 aaKnown RBP24.29■■□□□ 1.48
NEK3-202ENST00000550841 TCEAL9Q9UHQ7 104 aa24.29■■□□□ 1.48
NEK3-202ENST00000550841 KBTBD13C9JR72 458 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 KPNA6O60684 536 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 MYCNP04198 464 aaPredicted RBP24.28■■□□□ 1.48
NEK3-202ENST00000550841 FSCN1Q16658 493 aaKnown RBP24.28■■□□□ 1.48
NEK3-202ENST00000550841 CYFIP1Q7L576 1253 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 PPTC7Q8NI37 304 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 SPATA33Q96N06 139 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 RIT2Q99578 217 aa24.28■■□□□ 1.48
NEK3-202ENST00000550841 A6NJR5 290 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 DNM1LO00429 736 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 MSH4O15457 936 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 FERMT3Q86UX7 667 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 SLFN12Q8IYM2 578 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 PKD2L1Q9P0L9 805 aa24.27■■□□□ 1.48
NEK3-202ENST00000550841 NOP56O00567 594 aaKnown RBP24.26■■□□□ 1.47
NEK3-202ENST00000550841 NEMFO60524 1076 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 FARP2O94887 1054 aaPredicted RBP24.26■■□□□ 1.47
NEK3-202ENST00000550841 ZSCAN22P10073 491 aaPredicted RBP24.26■■□□□ 1.47
NEK3-202ENST00000550841 MCM7P33993 719 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 ZNF174Q15697 407 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 AFG1LQ8WV93 481 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 SLC5A5Q92911 643 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 JPH1Q9HDC5 661 aaPredicted RBP24.26■■□□□ 1.47
NEK3-202ENST00000550841 SLC9A2Q9UBY0 812 aa24.26■■□□□ 1.47
NEK3-202ENST00000550841 CENPFP49454 3210 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 MOXD2PA6NHM9 499 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 SLC37A4O43826 429 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 PPFIA4O75335 1185 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 TOB1P50616 345 aaPredicted RBP24.25■■□□□ 1.47
NEK3-202ENST00000550841 RESTQ13127 1097 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 ITGB3BPQ13352 177 aaPredicted RBP24.25■■□□□ 1.47
NEK3-202ENST00000550841 KCNA10Q16322 511 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 CALCRLQ16602 461 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 DGKDQ16760 1214 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 ETNPPLQ8TBG4 499 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 KCNMB3Q9NPA1 279 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 POLR3EQ9NVU0 708 aa24.25■■□□□ 1.47
NEK3-202ENST00000550841 CTAGE5O15320 804 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 GAS7O60861 476 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 BEX3Q00994 111 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 KRT76Q01546 638 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 LRCH2Q5VUJ6 765 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 SEPT1Q8WYJ6 367 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 TEKT3Q9BXF9 490 aa24.24■■□□□ 1.47
NEK3-202ENST00000550841 DHX15O43143 795 aaKnown RBP24.23■■□□□ 1.47
NEK3-202ENST00000550841 SORBS3O60504 671 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 CABYRO75952 493 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 MMP3P08254 477 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 PTGS1P23219 599 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 HSDL1Q3SXM5 330 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 CCSAPQ6IQ19 270 aaPredicted RBP24.23■■□□□ 1.47
NEK3-202ENST00000550841 ZNF746Q6NUN9 644 aaPredicted RBP24.23■■□□□ 1.47
NEK3-202ENST00000550841 POTEDQ86YR6 584 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 BCAS3Q9H6U6 928 aa24.23■■□□□ 1.47
NEK3-202ENST00000550841 FRMPD3Q5JV73 1810 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 MYADML2A6NDP7 307 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 LAD1O00515 517 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 BMP15O95972 392 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 ASGR1P07306 291 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 NUCB2P80303 420 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 DPF3Q92784 378 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 GPR20Q99678 358 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.22■■□□□ 1.47
NEK3-202ENST00000550841 CEP131Q9UPN4 1083 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 PHF24Q9UPV7 400 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 PCDHB6Q9Y5E3 794 aa24.22■■□□□ 1.47
NEK3-202ENST00000550841 WNT7AO00755 349 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 PSMD10O75832 226 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 F13A1P00488 732 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 MYL3P08590 195 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 ACLYP53396 1101 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 SP4Q02446 784 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 NECAB2Q7Z6G3 386 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 SMAP1Q8IYB5 467 aaPredicted RBP24.21■■□□□ 1.47
NEK3-202ENST00000550841 HAS1Q92839 578 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 MTMR9Q96QG7 549 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 UIMC1Q96RL1 719 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 PCDHA12Q9UN75 941 aa24.21■■□□□ 1.47
NEK3-202ENST00000550841 ELP1O95163 1332 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 DDX39AO00148 427 aaKnown RBP24.2■■□□□ 1.46
NEK3-202ENST00000550841 BRD1O95696 1058 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 HOXD8P13378 290 aaPredicted RBP24.2■■□□□ 1.46
NEK3-202ENST00000550841 SFNP31947 248 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 ACTR2P61160 394 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 MIS18BP1Q6P0N0 1132 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 RDM1Q8NG50 284 aa24.2■■□□□ 1.46
NEK3-202ENST00000550841 GLT1D1Q96MS3 346 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms