RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GBP3Q9H0R5 595 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 A0A1W2PQC6 194 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 RNF40O75150 1001 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 USP8P40818 1118 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 KCNA1Q09470 495 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 NAA35Q5VZE5 725 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 GJB7Q6PEY0 223 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 L1RE1Q9UN81 338 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 SORBS3O60504 671 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 MED24O75448 989 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 FGFR1OPO95684 399 aaKnown RBP15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 SFMBT2Q5VUG0 894 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 EHBP1Q8NDI1 1231 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 COL4A3BPQ9Y5P4 624 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 DDX60Q8IY21 1712 aaKnown RBP15.08■□□□□ 0.01
PRPF40B-209ENST00000548825 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0
PRPF40B-209ENST00000548825 TRAPPC11Q7Z392 1133 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 TRIM31Q9BZY9 425 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 ACBD3Q9H3P7 528 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 RIOX1Q9H6W3 641 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 CALCOCO1Q9P1Z2 691 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 SLC9A1P19634 815 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 GGCXP38435 758 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 FAM83BQ5T0W9 1011 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 RBM26Q5T8P6 1007 aaKnown RBP15.08■□□□□ 0
PRPF40B-209ENST00000548825 SFR1Q86XK3 245 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 SAMM50Q9Y512 469 aa15.08■□□□□ 0
PRPF40B-209ENST00000548825 F5H6K3 240 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 IL1R1P14778 569 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 ABCB4P21439 1286 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
PRPF40B-209ENST00000548825 KLRC3Q07444 240 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 AOC3Q16853 763 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 SLC9C1Q4G0N8 1177 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 ANKS1AQ92625 1134 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 MTMR8Q96EF0 704 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 MTMR9Q96QG7 549 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CUEDC2Q9H467 287 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 SNED1Q8TER0 1413 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 TBCAO75347 108 aaKnown RBP15.07■□□□□ 0
PRPF40B-209ENST00000548825 RAD17O75943 681 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 ATP1A2P50993 1020 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CYP2J2P51589 502 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 USP14P54578 494 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 AMPD2Q01433 879 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CPXCR1Q8N123 301 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 VGLL3A8MV65 326 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 PALMO75781 387 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 APBA3O96018 575 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 ECE1P42892 770 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 SP4Q02446 784 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CENPPQ6IPU0 288 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 C8orf74Q6P047 294 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CSRNP1Q96S65 589 aa15.07■□□□□ 0
PRPF40B-209ENST00000548825 CHORDC1Q9UHD1 332 aaPredicted RBP15.07■□□□□ 0
PRPF40B-209ENST00000548825 EIF3CLB5ME19 914 aaKnown RBP15.06■□□□□ 0
PRPF40B-209ENST00000548825 CETN3O15182 167 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 MYBP10242 640 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 ARHGAP4P98171 946 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 TRIM58Q8NG06 486 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 EIF3CQ99613 913 aaKnown RBP15.06■□□□□ 0
PRPF40B-209ENST00000548825 SELENOOQ9BVL4 669 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 BCCIPQ9P287 314 aaKnown RBP eCLIP15.06■□□□□ 0
PRPF40B-209ENST00000548825 STK17AQ9UEE5 414 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 DNM3Q9UQ16 869 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 TRIM66O15016 1216 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 ZEB2O60315 1214 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 GUCY2DQ02846 1103 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
PRPF40B-209ENST00000548825 MAP9Q49MG5 647 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 TXLNBQ8N3L3 684 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 MYCT1Q8N699 235 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 ELMO3Q96BJ8 720 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 KRT12Q99456 494 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
PRPF40B-209ENST00000548825 ARHGAP44Q17R89 818 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 ABCB5Q2M3G0 1257 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 ZC2HC1CQ53FD0 456 aaPredicted RBP15.05■□□□□ 0
PRPF40B-209ENST00000548825 GUF1Q8N442 669 aaKnown RBP15.05■□□□□ 0
PRPF40B-209ENST00000548825 NOX5Q96PH1 765 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 OSBPL9Q96SU4 736 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 AP1M1Q9BXS5 423 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 COA1Q9GZY4 146 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 EHD4Q9H223 541 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 MYO1AQ9UBC5 1043 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 LRP5O75197 1615 aa15.05■□□□□ 0
PRPF40B-209ENST00000548825 GOLGA6BA6NDN3 693 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
PRPF40B-209ENST00000548825 PSMD14O00487 310 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 KCNK3O14649 394 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 KLRC1P26715 233 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 CASP4P49662 377 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 KCNH2Q12809 1159 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 APOBEC3HQ6NTF7 200 aaKnown RBP15.05■□□□□ -0
PRPF40B-209ENST00000548825 FBXO11Q86XK2 927 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms