RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 JAKMIP2Q96AA8 810 aa20.55■□□□□ 0.88
PRPF40B-208ENST00000548436 MMRN2Q9H8L6 949 aa20.55■□□□□ 0.88
PRPF40B-208ENST00000548436 MYO6Q9UM54 1294 aa20.55■□□□□ 0.88
PRPF40B-208ENST00000548436 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 TRAF5O00463 557 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 SPATA31C1P0DKV0 1188 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 HERC4Q5GLZ8 1057 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 CC2D1AQ6P1N0 951 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 NELFCDQ8IXH7 590 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 CCDC155Q8N6L0 562 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 HERC5Q9UII4 1024 aaKnown RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 COL4A3BPQ9Y5P4 624 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 FRMD3A2A2Y4 597 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 ZNF263O14978 683 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 CYP27A1Q02318 531 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 WHAMMP3Q1A5X7 153 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 HAUS3Q68CZ6 603 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 RSBN1LQ6PCB5 846 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 CCDC84Q86UT8 332 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 CYP2W1Q8TAV3 490 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 ACER1Q8TDN7 264 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 SCFD1Q8WVM8 642 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 ANKZF1Q9H8Y5 726 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 ARHGAP20Q9P2F6 1191 aa20.54■□□□□ 0.88
PRPF40B-208ENST00000548436 MEIS1O00470 390 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 ENC1O14682 589 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 MSH4O15457 936 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 CIITAP33076 1130 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 KCNMA1Q12791 1236 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 KCTD10Q9H3F6 313 aa20.53■□□□□ 0.88
PRPF40B-208ENST00000548436 KRT86O43790 486 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 RAD17O75943 681 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 RPA1P27694 616 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 HDAC6Q9UBN7 1215 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 SYNPO2Q9UMS6 1093 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 DUSP10Q9Y6W6 482 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 ATAD5Q96QE3 1844 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 COL4A5P29400 1685 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.88
PRPF40B-208ENST00000548436 PLA2G4AP47712 749 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 STAT2P52630 851 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 KRT26Q7Z3Y9 468 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 BAP1Q92560 729 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 CCDC42Q96M95 316 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 FAM20AQ96MK3 541 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 ST7Q9NRC1 585 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 EMILIN3Q9NT22 766 aa20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 ZNF70Q9UC06 446 aaPredicted RBP20.52■□□□□ 0.87
PRPF40B-208ENST00000548436 CNTNAP1P78357 1384 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 LRRC53A6NM62 1247 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 IPO7O95373 1038 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 ATP1A1P05023 1023 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 KRT18P05783 430 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 EN1Q05925 392 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 PABPC4Q13310 644 aaKnown RBP eCLIP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 GIT2Q14161 759 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 ERMNQ8TAM6 284 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 SMCR8Q8TEV9 937 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 GMLQ99445 158 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 ZHX3Q9H4I2 956 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 ARHGEF10LQ9HCE6 1279 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 VAV3Q9UKW4 847 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 TMX2Q9Y320 296 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 MYH10P35580 1976 aa20.51■□□□□ 0.87
PRPF40B-208ENST00000548436 SASH3O75995 380 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CYP3A4P08684 503 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 DMTNQ08495 405 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 RRAGAQ7L523 313 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 SYT2Q8N9I0 419 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 PURBQ96QR8 312 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 PDGFDQ9GZP0 370 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 DNM3Q9UQ16 869 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CTAGE15A4D2H0 777 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 VIL1P09327 827 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CTAGE8P0CG41 777 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CASP5P51878 434 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 VAV2P52735 878 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CTAGE6Q86UF2 777 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CCDC125Q86Z20 511 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 GPIHBP1Q8IV16 184 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 CTAGE4Q8IX94 777 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 MSANTD4Q8NCY6 345 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-208ENST00000548436 EIF4A3P38919 411 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-208ENST00000548436 DLGAP5Q15398 846 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms