RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CNKSR3Q6P9H4 555 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 SKAP1Q86WV1 359 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 ATP6V0A1Q93050 837 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 GPR20Q99678 358 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 PCDHA6Q9UN73 950 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 PCDHA8Q9Y5H6 950 aa10.74□□□□□ -0.69
YBX3-218ENST00000546298 V9GY48 417 aaPredicted RBP10.74□□□□□ -0.69
YBX3-218ENST00000546298 RANBP2P49792 3224 aaKnown RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 KLF18A0A0U1RQI7 1052 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 hCG_1642624A0A1W2PR95 340 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 GOLGA8AA7E2F4 631 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 GOLGA8BA8MQT2 603 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 RSPH10B2B2RC85 870 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 CAND2O75155 1236 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 REC8O95072 547 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 CXCL10P02778 98 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 NEFLP07196 543 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 RSPH10BP0C881 870 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 SMIM10L2AP0DMW4 78 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 SMIM10L2BP0DMW5 78 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 IGFBP4P22692 258 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 PSMA5P28066 241 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 NAPAP54920 295 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 ZNF200P98182 395 aaPredicted RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 IKBKEQ14164 716 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 TRIM71Q2Q1W2 868 aaKnown RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 ADCK5Q3MIX3 580 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 UTP14CQ5TAP6 766 aaKnown RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 SERINC5Q86VE9 423 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 HERC6Q8IVU3 1022 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 SEPT1Q8WYJ6 367 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 KCNB2Q92953 911 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 TCEANC2Q96MN5 208 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 RNPEPQ9H4A4 650 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 BRPF3Q9ULD4 1205 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
YBX3-218ENST00000546298 UBIAD1Q9Y5Z9 338 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 LCTP09848 1927 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 EMSYQ7Z589 1322 aa10.73□□□□□ -0.69
YBX3-218ENST00000546298 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 NBNO60934 754 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 LGR5O75473 907 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 CA3P07451 260 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 MYOGP15173 224 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 ITGB5P18084 799 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 HSPA4P34932 840 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 THPOP40225 353 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 ADCY7P51828 1080 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 SP4Q02446 784 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 MTMR1Q13613 665 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 GPNMBQ14956 572 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 UBE2SQ16763 222 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 ZNF618Q5T7W0 954 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 BLOC1S2Q6QNY1 142 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 TNPO1Q92973 898 aaKnown RBP10.72□□□□□ -0.69
YBX3-218ENST00000546298 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 JADE2Q9NQC1 790 aa10.72□□□□□ -0.69
YBX3-218ENST00000546298 SMCO2A6NFE2 343 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 EPB41L2O43491 1005 aaKnown RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 TLL1O43897 1013 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 KCNA2P16389 499 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 HOXC8P31273 242 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.69
YBX3-218ENST00000546298 WDR5P61964 334 aaKnown RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 FUT2Q10981 343 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 AP3B2Q13367 1082 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 MCTP2Q6DN12 878 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 CCDC12Q8WUD4 166 aaPredicted RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 PPM1EQ8WY54 764 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 CNTNAP5Q8WYK1 1306 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 NRCAMQ92823 1304 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 GLG1Q92896 1179 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 MXRA8Q9BRK3 442 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.69
YBX3-218ENST00000546298 SMARCAD1Q9H4L7 1026 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 SETD4Q9NVD3 440 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 BARHL2Q9NY43 387 aa10.71□□□□□ -0.69
YBX3-218ENST00000546298 TREHO43280 583 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 ATP9AO75110 1047 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 AMHP03971 560 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 ZNF76P36508 570 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 ARHGAP4P98171 946 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 AKAP17AQ02040 695 aaKnown RBP10.7□□□□□ -0.7
YBX3-218ENST00000546298 ADGRE1Q14246 886 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 HIC1Q14526 733 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 TAF2Q6P1X5 1199 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 Q6ZUG5 572 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 RSPH3Q86UC2 560 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 TRIM50Q86XT4 487 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms