RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 SLX4Q8IY92 1834 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 ARFGEF1Q9Y6D6 1849 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 CCDC151A5D8V7 595 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 MAP2K7O14733 419 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 PLA2G4BP0C869 781 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 POLD1P28340 1107 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 DNA2P51530 1060 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 ZBED6P86452 979 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
DDX55-209ENST00000542286 GSPT2Q8IYD1 628 aaKnown RBP16.36■□□□□ 0.21
DDX55-209ENST00000542286 RAB34Q9BZG1 259 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 PDE11AQ9HCR9 933 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 ABCB6Q9NP58 842 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 SIPA1L1O43166 1804 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 ZBTB39O15060 712 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 IVLP07476 585 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 CXCR5P32302 372 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 EIF4A3P38919 411 aaKnown RBP16.36■□□□□ 0.21
DDX55-209ENST00000542286 PDIA5Q14554 519 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 MEA1Q16626 185 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 CAPN6Q9Y6Q1 641 aa16.36■□□□□ 0.21
DDX55-209ENST00000542286 SFI1A8K8P3 1242 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 RSPH10B2B2RC85 870 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 RSPH10BP0C881 870 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 FAM26FQ5R3K3 315 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 FOXR1Q6PIV2 292 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 PODNQ7Z5L7 613 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 YDJCA8MPS7 323 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 PDE2AO00408 941 aaPredicted RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 C21orf2O43822 256 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 GFPT1Q06210 699 aaPredicted RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 KCNMA1Q12791 1236 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ARSHQ5FYA8 562 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 MYOCDQ8IZQ8 938 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 SALL4Q9UJQ4 1053 aa16.35■□□□□ 0.21
DDX55-209ENST00000542286 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
DDX55-209ENST00000542286 hCG_1984214I3L0E3 225 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 MOCS3O95396 460 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 EHHADHQ08426 723 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 BRD3Q15059 726 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CCDC40Q4G0X9 1142 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CATSPER3Q86XQ3 398 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 FAM114A1Q8IWE2 563 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 ZNF713Q8N859 430 aaPredicted RBP16.34■□□□□ 0.21
DDX55-209ENST00000542286 ERGIC2Q96RQ1 377 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CSRNP1Q96S65 589 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 GEMIN8Q9NWZ8 242 aaKnown RBP16.34■□□□□ 0.21
DDX55-209ENST00000542286 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 OPLAHO14841 1288 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CHMP2AO43633 222 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 NCK2O43639 380 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 RAD17O75943 681 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 PACS2Q86VP3 889 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CEP112Q8N8E3 955 aa16.34■□□□□ 0.21
DDX55-209ENST00000542286 CYP11B2P19099 503 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 MAGEA9P43362 315 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 KCNA1Q09470 495 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.21
DDX55-209ENST00000542286 CCDC174Q6PII3 467 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 JADE2Q9NQC1 790 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 JRKLQ9Y4A0 524 aa16.33■□□□□ 0.21
DDX55-209ENST00000542286 H0YIN7 160 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 BUB1O43683 1085 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 MAN2A1Q16706 1144 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 PTPROQ16827 1216 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 STRIP1Q5VSL9 837 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 DEF6Q9H4E7 631 aa16.33■□□□□ 0.2
DDX55-209ENST00000542286 CYLC1P35663 651 aaPredicted RBP16.32■□□□□ 0.2
DDX55-209ENST00000542286 KIF11P52732 1056 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 KCNMB3Q9NPA1 279 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 ACTN1P12814 892 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 MATR3P43243 847 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX55-209ENST00000542286 C2orf54Q08AI8 447 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
DDX55-209ENST00000542286 LENG9Q96B70 501 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms