RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 TMCO2Q7Z6W1 182 aaPredicted RBP16.12■□□□□ 0.17
CCND1-204ENST00000539241 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 CUL5Q93034 780 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 LZTS2Q9BRK4 669 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 TUT1Q9H6E5 874 aaKnown RBP16.12■□□□□ 0.17
CCND1-204ENST00000539241 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
CCND1-204ENST00000539241 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
CCND1-204ENST00000539241 TRANK1O15050 2925 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 LCHNA4D1U4 455 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SH2B2O14492 632 aaPredicted RBP16.11■□□□□ 0.17
CCND1-204ENST00000539241 FIBPO43427 364 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 EIF5BO60841 1220 aaKnown RBP16.11■□□□□ 0.17
CCND1-204ENST00000539241 LGR5O75473 907 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 PLEKHA8P1O95397 391 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SMIM10L2AP0DMW4 78 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SMIM10L2BP0DMW5 78 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SMARCA1P28370 1054 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 HOXC8P31273 242 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 MCM5P33992 734 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 THPOP40225 353 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 IKBKEQ14164 716 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SPRED2Q7Z698 418 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 TMTC2Q8N394 836 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 TMEM87BQ96K49 555 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 XIRP2A4UGR9 3374 aa16.11■□□□□ 0.17
CCND1-204ENST00000539241 CCDC69A6NI79 296 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 RSPH10B2B2RC85 870 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 PIK3CDO00329 1044 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 MEIS2O14770 477 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 SLC27A2O14975 620 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
CCND1-204ENST00000539241 GJB5O95377 273 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 RSPH10BP0C881 870 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 GRB10Q13322 594 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 PCNX4Q63HM2 1172 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 KRT40Q6A162 431 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 XRRA1Q6P2D8 792 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
CCND1-204ENST00000539241 UHRF1Q96T88 793 aaPredicted RBP16.1■□□□□ 0.17
CCND1-204ENST00000539241 RAD9AQ99638 391 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 GPR20Q99678 358 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
CCND1-204ENST00000539241 REV3LO60673 3130 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 TREHO43280 583 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 RXRAP19793 462 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 LIFRP42702 1097 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
CCND1-204ENST00000539241 DBF4BQ8NFT6 615 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 RNPEPQ9H4A4 650 aa16.09■□□□□ 0.17
CCND1-204ENST00000539241 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
CCND1-204ENST00000539241 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
CCND1-204ENST00000539241 LPXNO60711 386 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 CALM1P0DP23 149 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 CALM2P0DP24 149 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 CALM3P0DP25 149 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 GNAT1P11488 350 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 SP4Q02446 784 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 TFF2Q03403 129 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
CCND1-204ENST00000539241 CREB3L3Q68CJ9 461 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 NLRX1Q86UT6 975 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 RAB11FIP4Q86YS3 637 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 CMTR1Q8N1G2 835 aaKnown RBP16.08■□□□□ 0.16
CCND1-204ENST00000539241 LRRC2Q9BYS8 371 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
CCND1-204ENST00000539241 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.16
CCND1-204ENST00000539241 CAND2O75155 1236 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 RNF20Q5VTR2 975 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCND1-204ENST00000539241 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 TGS1Q96RS0 853 aaKnown RBP16.07■□□□□ 0.16
CCND1-204ENST00000539241 SETD4Q9NVD3 440 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 TELO2Q9Y4R8 837 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
CCND1-204ENST00000539241 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 LINC01553A4QN01 128 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 AMHP03971 560 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 CTSHP09668 335 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 ERVK-21P61565 698 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
CCND1-204ENST00000539241 PLEKHG4Q58EX7 1191 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
CCND1-204ENST00000539241 CDHR1Q96JP9 859 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms