RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 LSP1P33241 339 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 IGHMBP2P38935 993 aaKnown RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 MRPL12P52815 198 aaKnown RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 NAP1L1P55209 391 aaKnown RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 CTSWP56202 376 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 IRX1P78414 480 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 PPARAQ07869 468 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 RIPK1Q13546 671 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 MTF1Q14872 753 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 E2F4Q16254 413 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PFKFB3Q16875 520 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 PREPLQ4J6C6 727 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 LRRC24Q50LG9 513 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PARP10Q53GL7 1025 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 LACTB2Q53H82 288 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 ODF2Q5BJF6 829 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 WLSQ5T9L3 541 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 NCAPH2Q6IBW4 605 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 RCSD1Q6JBY9 416 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PDXDC2PQ6P474 469 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 KRT25Q7Z3Z0 450 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 DGKHQ86XP1 1220 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 CREG2Q8IUH2 290 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD4-206ENST00000536999 NIM1KQ8IY84 436 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 CACNA2D3Q8IZS8 1091 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 NOA1Q8NC60 698 aaKnown RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 ACRBPQ8NEB7 543 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 TBC1D22AQ8WUA7 517 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 NUP133Q8WUM0 1156 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 SGSM3Q96HU1 749 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PHF12Q96QT6 1004 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 OSBPL9Q96SU4 736 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 SETDB2Q96T68 719 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 MMS19Q96T76 1030 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 IRX2Q9BZI1 471 aaPredicted RBP6.4□□□□□ -1.38
CHD4-206ENST00000536999 SLITRK6Q9H5Y7 841 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 GDF3Q9NR23 364 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 FAM114A2Q9NRY5 505 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 HOMER3Q9NSC5 361 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 TAB2Q9NYJ8 693 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 LRP2BPQ9P2M1 347 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 PCDHA4Q9UN74 947 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 ZBTB1Q9Y2K1 713 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 SLC4A4Q9Y6R1 1079 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 CAPN7Q9Y6W3 813 aa6.4□□□□□ -1.38
CHD4-206ENST00000536999 VCANP13611 3396 aa6.4□□□□□ -1.39
CHD4-206ENST00000536999 A0A087WWV3 80 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 TCRBV5S4A2TA0A5A2 114 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 CCDC169A6NNP5 214 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 NDC80O14777 642 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 LIN7AO14910 233 aaPredicted RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 PPP1R12AO14974 1030 aaPredicted RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 N4BP1O75113 896 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 FLOT1O75955 427 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ATP1A1P05023 1023 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 CYP19A1P11511 503 aaPredicted RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 GCFC2P16383 781 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 ITGA6P23229 1130 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 GPTP24298 496 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 HSPA9P38646 679 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 PRCPP42785 496 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 MCAMP43121 646 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 LIG3P49916 1009 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 GYS2P54840 703 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 NPEPPSP55786 919 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 STX17P56962 302 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 FKBP3Q00688 224 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 SLC39A6Q13433 755 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 BYSLQ13895 437 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 PDIA5Q14554 519 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ITIH4Q14624 930 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ZRSR2Q15696 482 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 PTGISQ16647 500 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 CCDC152Q4G0S7 254 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 CAVIN4Q5BKX8 364 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 TMTC3Q6ZXV5 915 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 TAOK1Q7L7X3 1001 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 NLRP14Q86W24 1093 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 TBC1D10CQ8IV04 446 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 BLIDQ8IZY5 108 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
CHD4-206ENST00000536999 TEX9Q8N6V9 391 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ANKS1AQ92625 1134 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 DPF3Q92784 378 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 FAM122AQ96E09 287 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 LRCH3Q96II8 777 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 EPSTI1Q96J88 318 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 CCT8L2Q96SF2 557 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 PSMD1Q99460 953 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 MXD3Q9BW11 206 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 TTYH3Q9C0H2 523 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ISCUQ9H1K1 167 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 EPC1Q9H2F5 836 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 ATP6V0A4Q9HBG4 840 aa6.39□□□□□ -1.39
CHD4-206ENST00000536999 CEP72Q9P209 647 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms