RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NAP1L2Q9ULW6 460 aaPredicted RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 YBX2Q9Y2T7 364 aaKnown RBP9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 CNTNAP5Q8WYK1 1306 aa9.81□□□□□ -0.84
SFSWAP-202ENST00000535202 TET1Q8NFU7 2136 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 COL6A3P12111 3177 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 KLF18A0A0U1RQI7 1052 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 SPDYE3A6NKU9 549 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 GOLGA8AA7E2F4 631 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 GOLGA8BA8MQT2 603 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 SPATA31C2B4DYI2 1134 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 DLL1O00548 723 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 LGALS2P05162 132 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 CKBP12277 381 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 MYOGP15173 224 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 SELPP16109 830 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 FGD1P98174 961 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 PTK7Q13308 1070 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 WWC2Q6AWC2 1192 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 XRRA1Q6P2D8 792 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 METTL7BQ6UX53 244 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 MAP7D2Q96T17 732 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 GAS2L1Q99501 681 aaPredicted RBP9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 C16orf70Q9BSU1 422 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 PRDM12Q9H4Q4 367 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 SLC28A3Q9HAS3 691 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 LAMA2P24043 3122 aaKnown RBP9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 PTPRSQ13332 1948 aa9.8□□□□□ -0.84
SFSWAP-202ENST00000535202 C17orf102A2RUQ5 167 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 H3BRB1 525 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 HMGB1P09429 215 aaKnown RBP9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 SMIM10L2AP0DMW4 78 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 SMIM10L2BP0DMW5 78 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 CPA1P15085 419 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 TERF1P54274 439 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 NAPAP54920 295 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 RBL2Q08999 1139 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 HIC1Q14526 733 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 UTP14CQ5TAP6 766 aaKnown RBP9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 PPP2R2DQ66LE6 453 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 TRIM50Q86XT4 487 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 WNT8BQ93098 351 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 JAKMIP1Q96N16 626 aaKnown RBP9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 SLC9A7Q96T83 725 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 GPR20Q99678 358 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 TUT1Q9H6E5 874 aaKnown RBP9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 PKD2L1Q9P0L9 805 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 PCDHA6Q9UN73 950 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 TELO2Q9Y4R8 837 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 PCDHA8Q9Y5H6 950 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 PCDHA11Q9Y5I1 949 aa9.79□□□□□ -0.84
SFSWAP-202ENST00000535202 RBAK-RBAKDNI3L0D1 243 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 NBNO60934 754 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 CDC27P30260 824 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 HSPA4P34932 840 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 THPOP40225 353 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 KCNJ6P48051 423 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 APOBRQ0VD83 1088 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 GPNMBQ14956 572 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 ZNF618Q5T7W0 954 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 CNKSR3Q6P9H4 555 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 BLOC1S2Q6QNY1 142 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 Q6ZUG5 572 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 ATP6V0A1Q93050 837 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 GPRASP2Q96D09 838 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 CDHR1Q96JP9 859 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 PGBD1Q96JS3 809 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 SENP7Q9BQF6 1050 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 ZNF215Q9UL58 517 aaPredicted RBP9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 SNX14Q9Y5W7 946 aa9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 V9GY48 417 aaPredicted RBP9.78□□□□□ -0.84
SFSWAP-202ENST00000535202 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 STXBP3O00186 592 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 TREHO43280 583 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 ATP9AO75110 1047 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 REC8O95072 547 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 CXCL10P02778 98 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 CA3P07451 260 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 KCNA2P16389 499 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 ITGB5P18084 799 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 IGFBP4P22692 258 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 TCF7P36402 384 aaPredicted RBP9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 METAP2P50579 478 aaKnown RBP eCLIP9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 ADCY7P51828 1080 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 FUT2Q10981 343 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 MTMR1Q13613 665 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 TRAF7Q6Q0C0 670 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 SERINC5Q86VE9 423 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 HERC6Q8IVU3 1022 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms