RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AGBL4Q5VU57 503 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 PCSK4Q6UW60 755 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 RUFY4Q6ZNE9 571 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 FBXO33Q7Z6M2 555 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 RIOX2Q8IUF8 465 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 KIAA0825Q8IV33 1275 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 ZCCHC14Q8WYQ9 949 aaKnown RBP1.66□□□□□ -2.14
COPB1-212ENST00000534771 COPS5Q92905 334 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 TRMT2BQ96GJ1 504 aaKnown RBP1.66□□□□□ -2.14
COPB1-212ENST00000534771 FGD4Q96M96 766 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 LMF1Q96S06 567 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 WRNIP1Q96S55 665 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 TMEM209Q96SK2 561 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 SPON2Q9BUD6 331 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 MEGF9Q9H1U4 602 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 DTLQ9NZJ0 730 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 CLEC1BQ9P126 229 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 AKT3Q9Y243 479 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 SUGT1Q9Y2Z0 365 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 TIMM13Q9Y5L4 95 aaPredicted RBP1.66□□□□□ -2.14
COPB1-212ENST00000534771 X6R8D5 127 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 A0A0A6YYK5 440 aaPredicted RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 RAMP2O60895 175 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 CNOT4O95628 575 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 EPHX1P07099 455 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 MAKP20794 623 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 ACO1P21399 889 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 RPL11P62913 178 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 SCRN1Q12765 414 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 INF2Q27J81 1249 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 MBLAC2Q68D91 279 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 POMZP3Q6PJE2 187 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 TEPPQ6URK8 271 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 RALYLQ86SE5 291 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 IFNL2Q8IZJ0 200 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 ARRDC4Q8NCT1 418 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 NUDT10Q8NFP7 164 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 LARP4BQ92615 738 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 NUDT11Q96G61 164 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 TMEM169Q96HH4 297 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 PLEKHG4BQ96PX9 1271 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 LRRC37BQ96QE4 947 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 CRBNQ96SW2 442 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 KLHL25Q9H0H3 589 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 PHAXQ9H814 394 aaKnown RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 CYP26B1Q9NR63 512 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 CGGBP1Q9UFW8 167 aaPredicted RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 TMEFF2Q9UIK5 374 aaPredicted RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 TIMELESSQ9UNS1 1208 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 ZNF652Q9Y2D9 606 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 COA3Q9Y2R0 106 aaPredicted RBP1.65□□□□□ -2.15
COPB1-212ENST00000534771 SLC4A7Q9Y6M7 1214 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
COPB1-212ENST00000534771 TCRBV5S2A0A599 114 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 SUPT5HO00267 1087 aaKnown RBP1.64□□□□□ -2.15
COPB1-212ENST00000534771 NOP56O00567 594 aaKnown RBP1.64□□□□□ -2.15
COPB1-212ENST00000534771 MYO1BO43795 1136 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 MAFKO60675 156 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 TADA3O75528 432 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 KLHL18O94889 574 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 FBXO21O94952 628 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 KCNH1O95259 989 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 NUDT3O95989 172 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 CHGBP05060 677 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 ADH4P08319 380 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 C1SP09871 688 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 COL6A1P12109 1028 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 FPR2P25090 351 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 BCL6P41182 706 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 TUBA3CQ13748 450 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 SMAD2Q15796 467 aaKnown RBP1.64□□□□□ -2.15
COPB1-212ENST00000534771 STEAP3Q658P3 488 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 TUBA3EQ6PEY2 450 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 TMC5Q6UXY8 1006 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 DNAJC14Q6Y2X3 702 aaPredicted RBP1.64□□□□□ -2.15
COPB1-212ENST00000534771 Q6ZSN1 163 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 Q6ZUG5 572 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 ULK2Q8IYT8 1036 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 FUKQ8N0W3 1084 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 CRACR2BQ8N4Y2 399 aaPredicted RBP1.64□□□□□ -2.15
COPB1-212ENST00000534771 ZNF366Q8N895 744 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 BVESQ8NE79 360 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 FAM89AQ96GI7 184 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 AJUBAQ96IF1 538 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 CHAMP1Q96JM3 812 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 APBA2Q99767 749 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 PRRX2Q99811 253 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 HSPBP1Q9NZL4 362 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 PPT2Q9UMR5 302 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 PCDHB10Q9UN67 800 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 WASF3Q9UPY6 502 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 EMC9Q9Y3B6 208 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 PCDHB4Q9Y5E5 795 aa1.64□□□□□ -2.15
COPB1-212ENST00000534771 A0A1W2PQH9 124 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 ANKRD34BA5PLL1 514 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 H7BY64 318 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 U2SURPO15042 1029 aaKnown RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 DGKIO75912 1065 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 RAD17O75943 681 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 KNG1P01042 644 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms