RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 FBLN1P23142 703 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 MSNP26038 577 aaKnown RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 CHMLP26374 656 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 LTKP29376 864 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 HOXC9P31274 260 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 ETV3P41162 512 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 GABREP78334 506 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 COL9A3Q14050 684 aaPredicted RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 AMOTQ4VCS5 1084 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 MCTP1Q6DN14 999 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 LETMD1Q6P1Q0 360 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 SLC4A10Q6U841 1118 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 BRAPQ7Z569 592 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 WDR75Q8IWA0 830 aaKnown RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 TRIM59Q8IWR1 403 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 CNTROBQ8N137 903 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 RIN3Q8TB24 985 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 DDX1Q92499 740 aaKnown RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 OSBP2Q969R2 916 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 RCC1LQ96I51 464 aaKnown RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 DSCC1Q9BVC3 393 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 LMBRD1Q9NUN5 540 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 EMC9Q9Y3B6 208 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 DAGLAQ9Y4D2 1042 aa5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 MED1Q15648 1581 aaPredicted RBP5.54□□□□□ -1.52
CYCSP28-201ENST00000534284 FER1L4A9Z1Z3 1794 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 BLACEA4D250 179 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 RRP9O43818 475 aaKnown RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 KPNA6O60684 536 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ALDH1L1O75891 902 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 DNAJC8O75937 253 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 GLRX3O76003 335 aaKnown RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 POU3F3P20264 500 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 COL8A1P27658 744 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ECI1P42126 302 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 DGKGP49619 791 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 MTX1Q13505 466 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 UVSSAQ2YD98 709 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ANKRD34AQ69YU3 496 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 GTF2IRD2BQ6EKJ0 949 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 IGF2-ASQ6U949 168 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 LRSAM1Q6UWE0 723 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 UBE2R2Q712K3 238 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 PODNQ7Z5L7 613 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 GTF2IRD2Q86UP8 949 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 AGGF1Q8N302 714 aaeCLIP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 AFAP1L2Q8N4X5 818 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 C2CD4AQ8NCU7 369 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 SLC7A14Q8TBB6 771 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 WDR66Q8TBY9 1149 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 PPP1R13LQ8WUF5 828 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 IP6K1Q92551 441 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 TMX3Q96JJ7 454 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 MRGPRX3Q96LB0 322 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ZSCAN31Q96LW9 406 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 MAGEB10Q96LZ2 347 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 ZDHHC15Q96MV8 337 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 PSMD1Q99460 953 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 YIPF2Q9BWQ6 316 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 SLC52A2Q9HAB3 445 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 RRAGDQ9NQL2 400 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 LRRC4BQ9NT99 713 aa5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 CGGBP1Q9UFW8 167 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 TPX2Q9ULW0 747 aaKnown RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 TNPO3Q9Y5L0 923 aaKnown RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 CEP170BQ9Y4F5 1589 aaPredicted RBP5.53□□□□□ -1.52
CYCSP28-201ENST00000534284 RAD50Q92878 1312 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 NWD1Q149M9 1564 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 DLX3O60479 287 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 KATNA1O75449 491 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 TIAF1O95411 115 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ASLP04424 464 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 JMJD7P0C870 316 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ITGB7P26010 798 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 HOXC12P31275 282 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 HSPA4P34932 840 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 IGFALSP35858 605 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 CFAP100Q494V2 611 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 PLEKHO1Q53GL0 409 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 USP53Q70EK8 1073 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 MTERF4Q7Z6M4 381 aaKnown RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 STRA8Q7Z7C7 330 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 C16orf71Q8IYS4 520 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ARHGEF39Q8N4T4 335 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 FIBCD1Q8N539 461 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 PTPRN2Q92932 1015 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 CHMP4CQ96CF2 233 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 MTMR8Q96EF0 704 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 PDLIM2Q96JY6 352 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 CCDC140Q96MF4 163 aa5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 NAP1L5Q96NT1 182 aaPredicted RBP5.52□□□□□ -1.53
CYCSP28-201ENST00000534284 MAP7D2Q96T17 732 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms