RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SP4Q02446 784 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 IMMTQ16891 758 aaKnown RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 FIBCD1Q8N539 461 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 DIAPH3Q9NSV4 1193 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 FAM50BQ9Y247 325 aa15.13■□□□□ 0.01
COPB1-209ENST00000533096 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
COPB1-209ENST00000533096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.12■□□□□ 0.01
COPB1-209ENST00000533096 LGALS2P05162 132 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 TGFB3P10600 412 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 CYFIP1Q7L576 1253 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 FBXL18Q96ME1 805 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 PIGSQ96S52 555 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 KRT23Q9C075 422 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 NSUN3Q9H649 340 aaKnown RBP15.12■□□□□ 0.01
COPB1-209ENST00000533096 ZMYM6O95789 1325 aa15.12■□□□□ 0.01
COPB1-209ENST00000533096 POTEB3A0JP26 581 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 ZBTB5O15062 677 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 GNAT1P11488 350 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 HOXD8P13378 290 aaPredicted RBP15.11■□□□□ 0.01
COPB1-209ENST00000533096 CTNNB1P35222 781 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 ARHGAP4P98171 946 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 POTEBQ6S5H4 581 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 UPF3BQ9BZI7 483 aaKnown RBP15.11■□□□□ 0.01
COPB1-209ENST00000533096 TELO2Q9Y4R8 837 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 SCN10AQ9Y5Y9 1956 aa15.11■□□□□ 0.01
COPB1-209ENST00000533096 REV3LO60673 3130 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 LCTP09848 1927 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 GRM6O15303 877 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 ZP2Q05996 745 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 DLX2Q07687 328 aaPredicted RBP15.1■□□□□ 0.01
COPB1-209ENST00000533096 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
COPB1-209ENST00000533096 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 TRIM50Q86XT4 487 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 USP26Q9BXU7 913 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 MAP3K20Q9NYL2 800 aaKnown RBP15.1■□□□□ 0.01
COPB1-209ENST00000533096 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 TET1Q8NFU7 2136 aa15.1■□□□□ 0.01
COPB1-209ENST00000533096 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.013e-9■■■■■ 105.7
COPB1-209ENST00000533096 IRS1P35568 1242 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 BMPR1AP36894 532 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 LTBRP36941 435 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 NHLH1Q02575 133 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 HFE2Q6ZVN8 426 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 CYB5R4Q7L1T6 521 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 TICAM2Q86XR7 235 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 ADHFE1Q8IWW8 467 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 ALG13Q9NP73 1137 aaKnown RBP15.09■□□□□ 0.01
COPB1-209ENST00000533096 MUTYHQ9UIF7 546 aa15.09■□□□□ 0.01
COPB1-209ENST00000533096 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0
COPB1-209ENST00000533096 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
COPB1-209ENST00000533096 ENPP3O14638 875 aa15.08■□□□□ 0
COPB1-209ENST00000533096 CHRNA1P02708 482 aa15.08■□□□□ 0
COPB1-209ENST00000533096 GHRP10912 638 aa15.08■□□□□ 0
COPB1-209ENST00000533096 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
COPB1-209ENST00000533096 MRPS9P82933 396 aaKnown RBP15.08■□□□□ 0
COPB1-209ENST00000533096 HYAL1Q12794 435 aa15.08■□□□□ 0
COPB1-209ENST00000533096 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
COPB1-209ENST00000533096 BTG3Q14201 252 aaPredicted RBP15.08■□□□□ 0
COPB1-209ENST00000533096 NEDD9Q14511 834 aa15.08■□□□□ 0
COPB1-209ENST00000533096 APBB2Q92870 758 aa15.08■□□□□ 0
COPB1-209ENST00000533096 GPR20Q99678 358 aa15.08■□□□□ 0
COPB1-209ENST00000533096 CNNM2Q9H8M5 875 aa15.08■□□□□ 0
COPB1-209ENST00000533096 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
COPB1-209ENST00000533096 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
COPB1-209ENST00000533096 LINC01565O15544 149 aa15.07■□□□□ 0
COPB1-209ENST00000533096 NCK2O43639 380 aa15.07■□□□□ 0
COPB1-209ENST00000533096 TRAF1Q13077 416 aa15.07■□□□□ 0
COPB1-209ENST00000533096 SLC35G1Q2M3R5 365 aa15.07■□□□□ 0
COPB1-209ENST00000533096 PLEKHM2Q8IWE5 1019 aa15.07■□□□□ 0
COPB1-209ENST00000533096 MTMR8Q96EF0 704 aa15.07■□□□□ 0
COPB1-209ENST00000533096 MFSD14AQ96MC6 490 aa15.07■□□□□ 0
COPB1-209ENST00000533096 C11orf84Q9BUA3 381 aaPredicted RBP15.07■□□□□ 0
COPB1-209ENST00000533096 ZNF215Q9UL58 517 aaPredicted RBP15.07■□□□□ 0
COPB1-209ENST00000533096 PNMA6FA0A0J9YX94 578 aa15.06■□□□□ 0
COPB1-209ENST00000533096 STXBP3O00186 592 aa15.06■□□□□ 0
COPB1-209ENST00000533096 IFIT3O14879 490 aaKnown RBP15.06■□□□□ 0
COPB1-209ENST00000533096 MBTPS2O43462 519 aa15.06■□□□□ 0
COPB1-209ENST00000533096 PPFIA3O75145 1194 aa15.06■□□□□ 0
COPB1-209ENST00000533096 RB1P06400 928 aa15.06■□□□□ 0
COPB1-209ENST00000533096 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
COPB1-209ENST00000533096 TRDNQ13061 729 aa15.06■□□□□ 0
COPB1-209ENST00000533096 SEC23AQ15436 765 aa15.06■□□□□ 0
COPB1-209ENST00000533096 FAM26DQ5JW98 314 aa15.06■□□□□ 0
COPB1-209ENST00000533096 METTL7BQ6UX53 244 aa15.06■□□□□ 0
COPB1-209ENST00000533096 RUFY4Q6ZNE9 571 aa15.06■□□□□ 0
COPB1-209ENST00000533096 RNF135Q8IUD6 432 aa15.06■□□□□ 0
COPB1-209ENST00000533096 SAMD3Q8N6K7 520 aa15.06■□□□□ 0
COPB1-209ENST00000533096 LMBR1Q8WVP7 490 aa15.06■□□□□ 0
COPB1-209ENST00000533096 DSCC1Q9BVC3 393 aa15.06■□□□□ 0
COPB1-209ENST00000533096 SENP2Q9HC62 589 aa15.06■□□□□ 0
COPB1-209ENST00000533096 PKD2L1Q9P0L9 805 aa15.06■□□□□ 0
COPB1-209ENST00000533096 FIBPO43427 364 aa15.05■□□□□ -0
COPB1-209ENST00000533096 CAND2O75155 1236 aa15.05■□□□□ -0
COPB1-209ENST00000533096 MARK3P27448 753 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms