RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 S100A6P06703 90 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 TROVE2P10155 538 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 BCRP11274 1271 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 HIBADHP31937 336 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CSTF2P33240 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 MXI1P50539 228 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 ROR2Q01974 943 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SREBF2Q12772 1141 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CUL4BQ13620 913 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SUPT20HL1Q3ZLR7 823 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 ALFQ53S48 1182 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SYCP2LQ5T4T6 812 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CREB3L3Q68CJ9 461 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 ABRAXAS1Q6UWZ7 409 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 PPFIBP1Q86W92 1011 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 LSMEM2Q8N112 164 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 LILRB1Q8NHL6 650 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CDKL2Q92772 493 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SH3KBP1Q96B97 665 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SUCLG2Q96I99 432 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 HERC2P3Q9BVR0 1158 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.33□□□□□ -1.088e-7■■■■■ 26.9
HDAC3-216ENST00000523088 DNAI2Q9GZS0 605 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 SLKQ9H2G2 1235 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 BICC1Q9H694 974 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 PCDH18Q9HCL0 1135 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 DNAAF2Q9NVR5 837 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 STAP2Q9UGK3 403 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CCPG1Q9ULG6 757 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 TACC3Q9Y6A5 838 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 SEMA3EO15041 775 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ATP9BO43861 1147 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 SNX2O60749 519 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 AOC2O75106 756 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 COBLO75128 1261 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 TAF5LO75529 589 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 PDE8BO95263 885 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 YEATS4O95619 227 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 IFIT1P09914 478 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 RAC2P15153 192 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 DESP17661 470 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 RANBP1P43487 201 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 AP2B1P63010 937 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 MOGSQ13724 837 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 DPYSQ14117 519 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 TTLL12Q14166 644 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 MAP7Q14244 749 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ZC3H12BQ5HYM0 836 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 CWF19L1Q69YN2 538 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 FCRLBQ6BAA4 426 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ADALQ6DHV7 355 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 RASGRP2Q7LDG7 609 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 BRAPQ7Z569 592 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 IQCA1Q86XH1 822 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 LRRC43Q8N309 656 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 PDCD7Q8N8D1 485 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 PPP1R14CQ8TAE6 165 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 CCDC110Q8TBZ0 833 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 HPS3Q969F9 1004 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ZBED3Q96IU2 234 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 UPF3BQ9BZI7 483 aaKnown RBP8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 IL1RAPL1Q9NZN1 696 aa8.32□□□□□ -1.08
HDAC3-216ENST00000523088 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 EIF3CLB5ME19 914 aaKnown RBP8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CHUKO15111 745 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 TSPAN1O60635 241 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 LILRB3O75022 631 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 TADA3O75528 432 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CIAO1O76071 339 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 ARIH2O95376 493 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 ATP5JP18859 108 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 KLRK1P26718 216 aa8.31□□□□□ -1.08
HDAC3-216ENST00000523088 CCT6AP40227 531 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms