RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 RBL2Q08999 1139 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 PTK7Q13308 1070 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 GPRASP2Q96D09 838 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 C16orf70Q9BSU1 422 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 SLC28A3Q9HAS3 691 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 NAP1L2Q9ULW6 460 aaPredicted RBP12.5□□□□□ -0.41
PVT1-216ENST00000523068 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
PVT1-216ENST00000523068 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 MAFGO15525 162 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
PVT1-216ENST00000523068 LGALS2P05162 132 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 CKBP12277 381 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
PVT1-216ENST00000523068 PSMA5P28066 241 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
PVT1-216ENST00000523068 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 LRRC8DQ7L1W4 858 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 PHOSPHO2Q8TCD6 241 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
PVT1-216ENST00000523068 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 SLC9A7Q96T83 725 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 GPR20Q99678 358 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 RIC8AQ9NPQ8 531 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
PVT1-216ENST00000523068 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 SNX14Q9Y5W7 946 aa12.49□□□□□ -0.41
PVT1-216ENST00000523068 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 FOSP01100 380 aaPredicted RBP12.48□□□□□ -0.41
PVT1-216ENST00000523068 GNAT1P11488 350 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 FUT2Q10981 343 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 MTMR1Q13613 665 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 UBE2SQ16763 222 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 Q6ZUG5 572 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 FBXL16Q8N461 479 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
PVT1-216ENST00000523068 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
PVT1-216ENST00000523068 ATP6V0A1Q93050 837 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 GAS2L1Q99501 681 aaPredicted RBP12.48□□□□□ -0.41
PVT1-216ENST00000523068 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
PVT1-216ENST00000523068 PTPRSQ13332 1948 aa12.48□□□□□ -0.41
PVT1-216ENST00000523068 EMSYQ7Z589 1322 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 STXBP3O00186 592 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 CXCL10P02778 98 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 SMIM10L2AP0DMW4 78 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 SMIM10L2BP0DMW5 78 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 KCNJ6P48051 423 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 ADCY7P51828 1080 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 APOBRQ0VD83 1088 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
PVT1-216ENST00000523068 BRF1Q92994 677 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 JADE2Q9NQC1 790 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
PVT1-216ENST00000523068 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
PVT1-216ENST00000523068 NID2Q14112 1375 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 EFCAB14O75071 495 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 CAND2O75155 1236 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 CPA1P15085 419 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 KCNA2P16389 499 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 ITGB5P18084 799 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 RPS6KB1P23443 525 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 CDC27P30260 824 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 HOXC8P31273 242 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
PVT1-216ENST00000523068 RABGGTBP53611 331 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 ZNF200P98182 395 aaPredicted RBP12.46□□□□□ -0.41
PVT1-216ENST00000523068 SP4Q02446 784 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 AP3B2Q13367 1082 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 PFKFB3Q16875 520 aaPredicted RBP12.46□□□□□ -0.41
PVT1-216ENST00000523068 SERINC5Q86VE9 423 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.46□□□□□ -0.41
PVT1-216ENST00000523068 SEPT1Q8WYJ6 367 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 RNPEPQ9H4A4 650 aa12.46□□□□□ -0.41
PVT1-216ENST00000523068 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
PVT1-216ENST00000523068 MICAL3Q7RTP6 2002 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 ABHD14A-ACY1A0A1B0GW23 586 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 RSPH10B2B2RC85 870 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 NBNO60934 754 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 ATP9AO75110 1047 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 RSPH10BP0C881 870 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 SCG2P13521 617 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
PVT1-216ENST00000523068 THPOP40225 353 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 AKAP17AQ02040 695 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms