RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TROAPQ12815 778 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 NAA25Q14CX7 972 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ODF2Q5BJF6 829 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 C10orf76Q5T2E6 689 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 PDXDC1Q6P996 788 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 RAPGEF5Q92565 580 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 TAF4BQ92750 862 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 CHMP6Q96FZ7 201 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
SCLT1-208ENST00000506368 ATP8B3O60423 1300 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 CICQ96RK0 1608 aaPredicted RBP17.45■□□□□ 0.38
SCLT1-208ENST00000506368 MYH3P11055 1940 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 CCT8L1PA6NM43 557 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 BUB1BO60566 1050 aaPredicted RBP17.45■□□□□ 0.38
SCLT1-208ENST00000506368 ITGA6P23229 1130 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 PHKA1P46020 1223 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
SCLT1-208ENST00000506368 GALNT17Q6IS24 598 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
SCLT1-208ENST00000506368 SPATS2LQ9NUQ6 558 aaKnown RBP17.45■□□□□ 0.38
SCLT1-208ENST00000506368 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
SCLT1-208ENST00000506368 LRRC53A6NM62 1247 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SOCS7O14512 581 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 NCK2O43639 380 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 PRDM1O75626 825 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SERPING1P05155 500 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SARNPP82979 210 aaKnown RBP17.44■□□□□ 0.38
SCLT1-208ENST00000506368 PDE4DQ08499 809 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 HLTFQ14527 1009 aaKnown RBP eCLIP17.44■□□□□ 0.383e-6■■□□□ 14.5
SCLT1-208ENST00000506368 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 ENAHQ8N8S7 591 aaPredicted RBP17.44■□□□□ 0.38
SCLT1-208ENST00000506368 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 TCP11Q8WWU5 503 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 BAP1Q92560 729 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SLC12A4Q9UP95 1085 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
SCLT1-208ENST00000506368 RAD51CO43502 376 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SLC5A1P13866 664 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 FGFR2P21802 821 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 ATP2B2Q01814 1243 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 RASSF7Q02833 373 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 LRRC63Q05C16 580 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 BYSLQ13895 437 aaKnown RBP17.44■□□□□ 0.38
SCLT1-208ENST00000506368 HOOK3Q86VS8 718 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 EGFL6Q8IUX8 553 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 PSMB7Q99436 277 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 SH3GL3Q99963 347 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 EHD2Q9NZN4 543 aa17.44■□□□□ 0.38
SCLT1-208ENST00000506368 ESYT3A0FGR9 886 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 GNPATO15228 680 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 STARD3NLO95772 234 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 FGRP09769 529 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 DRD4P21917 467 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 NBPF20Q3BBV1 942 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 ERMARDQ5T6L9 678 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 RRAGAQ7L523 313 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 CCDC63Q8NA47 563 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 PSMD1Q99460 953 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 TRIM9Q9C026 710 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 SMARCAL1Q9NZC9 954 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 CEP72Q9P209 647 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 C15orf41Q9Y2V0 281 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 PALMO75781 387 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 ECHS1P30084 290 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
SCLT1-208ENST00000506368 E2F5Q15329 346 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 QPCTQ16769 361 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 BLIDQ8IZY5 108 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 FAM129AQ9BZQ8 928 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 SLITRK6Q9H5Y7 841 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 NOP53Q9NZM5 478 aaKnown RBP17.43■□□□□ 0.38
SCLT1-208ENST00000506368 SALL4Q9UJQ4 1053 aa17.43■□□□□ 0.38
SCLT1-208ENST00000506368 ALADP13716 330 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 CTSWP56202 376 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 ZNF268Q14587 947 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-208ENST00000506368 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 SPAG5Q96R06 1193 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 PDGFDQ9GZP0 370 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-208ENST00000506368 MMRN2Q9H8L6 949 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 FAM114A2Q9NRY5 505 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 TCP11L1Q9NUJ3 509 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
SCLT1-208ENST00000506368 ZSCAN5CA6NGD5 496 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SEPT2Q15019 361 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 PPP1R7Q15435 360 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 APLFQ8IW19 511 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms